RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 ATG16L1Q676U5 607 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 CDC73Q6P1J9 531 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 UNC5DQ6UXZ4 953 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 SPNS3Q6ZMD2 512 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 SHISA6Q6ZSJ9 500 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 Q6ZVQ6 151 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 Q71RC1 249 aaPredicted RBP-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 HSD17B13Q7Z5P4 300 aaPredicted RBP-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 ZNF100Q8IYN0 542 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 CEP57L1Q8IYX8 460 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 COL27A1Q8IZC6 1860 aaPredicted RBP-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 ZNF664Q8N3J9 261 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 DEFB119Q8N690 84 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 SUMF2Q8NBJ7 301 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 KIAA0895Q8NCT3 520 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 DUSP18Q8NEJ0 188 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 OR10H4Q8NGA5 316 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 OR4K1Q8NGD4 311 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 OR10Q1Q8NGQ4 319 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 ZNF671Q8TAW3 534 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 DCUN1D4Q92564 292 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 PTERQ96BW5 349 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 SNRNP40Q96DI7 357 aaKnown RBP-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 SLC25A38Q96DW6 304 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 OR10C1Q96KK4 312 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 COG8Q96MW5 612 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 MAP7D2Q96T17 732 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 POLR3GLQ9BT43 218 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 Q9H3A6 140 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 TPK1Q9H3S4 243 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 ELL3Q9HB65 397 aaPredicted RBP-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 EML4Q9HC35 981 aaKnown RBP-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 SH3GLB2Q9NR46 395 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 ABCB8Q9NUT2 735 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 EXOC1Q9NV70 894 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 PILRBQ9UKJ0 227 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 SARDHQ9UL12 918 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 NAP1L2Q9ULW6 460 aaPredicted RBP-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 PRPF19Q9UMS4 504 aaKnown RBP-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 NENFQ9UMX5 172 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 DUSP12Q9UNI6 340 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 TMED3Q9Y3Q3 217 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 SVILO95425 2214 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 NEBP20929 6669 aa-0.34□□□□□ -2.46
RNU6-54P-201ENST00000365563 NEDD4P46934 1319 aa-0.35□□□□□ -2.46
RNU6-54P-201ENST00000365563 MUC21A0A0G2JKD1 596 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 IGHV3-64DA0A0J9YX35 117 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 A0A0J9YXV3 536 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 MUC21A0A140T8X8 626 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 A0A1B0GWB2 263 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 RNF212BA8MTL3 300 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 IPO5O00410 1097 aaKnown RBP-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 RTCAO00442 366 aaKnown RBP-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 SCAMP1O15126 338 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 PRAMEF11O60813 436 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 MBD4O95243 580 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 IGLV6-57P01721 117 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 CD4P01730 458 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 YES1P07947 543 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 POLR2MP0CAP2 368 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 RCC1P18754 421 aaPredicted RBP-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 KIR2DS2P43631 304 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 LHX1P48742 406 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 RPS27AP62979 156 aaKnown RBP-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 VLDLRP98155 873 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 MAT1AQ00266 395 aaKnown RBP-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 MAP2K1Q02750 393 aaPredicted RBP-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 C17orf67Q0P5P2 114 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 BIRC3Q13489 604 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 SLC12A1Q13621 1099 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 NTRK2Q16620 822 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 ZSCAN23Q3MJ62 389 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 ODF2Q5BJF6 829 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 ODR4Q5SWX8 454 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 ZNF57Q68EA5 555 aaPredicted RBP-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 IL31Q6EBC2 164 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 OR4C11Q6IEV9 310 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 MORN3Q6PF18 240 aaPredicted RBP-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 TMCO3Q6UWJ1 677 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 ARSKQ6UWY0 536 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 TRMT11Q7Z4G4 463 aaKnown RBP-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 CCDC60Q8IWA6 550 aaPredicted RBP-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 MCEMP1Q8IX19 187 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 GPR65Q8IYL9 337 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 CACNA2D3Q8IZS8 1091 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 ELMOD1Q8N336 334 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 RYBPQ8N488 228 aaPredicted RBP-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 CLEC1AQ8NC01 280 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 OR2L3Q8NG85 312 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 TTC8Q8TAM2 541 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 TSACCQ96A04 125 aaPredicted RBP-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 SGCZQ96LD1 299 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 KLHL5Q96PQ7 755 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 NEDD4LQ96PU5 975 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 NEK1Q96PY6 1258 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 PCDHB18PQ96TA0 734 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 NCAPGQ9BPX3 1015 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 CCDC3Q9BQI4 270 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 PAGR1Q9BTK6 254 aa-0.35□□□□□ -2.47
RNU6-54P-201ENST00000365563 PRRG4Q9BZD6 226 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms