RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 CD8BP10966 210 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 TMEM115Q12893 351 aaPredicted RBP13.33□□□□□ -0.28
COL6A1-201ENST00000361866 GPR68Q15743 365 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 SBSNQ6UWP8 590 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 TMEM179BQ7Z7N9 219 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 LINC01465Q8N7H1 131 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 ZNF461Q8TAF7 563 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 MYLIPQ8WY64 445 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 SLC39A13Q96H72 371 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 NECTIN4Q96NY8 510 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 MTG2Q9H4K7 406 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 ENAMQ9NRM1 1142 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 P2RX2Q9UBL9 471 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 HCN2Q9UL51 889 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 ARFGEF1Q9Y6D6 1849 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 GMFGO60234 142 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 PTGS2P35354 604 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 ZNF81P51508 661 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 SELENOWP63302 87 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 NADSYN1Q6IA69 706 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 LINGO2Q7L985 606 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 PHC2Q8IXK0 858 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 KLHL36Q8N4N3 616 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 SAMD12Q8N8I0 201 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 OR8J1Q8NGP2 316 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 MRPL48Q96GC5 212 aaKnown RBP13.33□□□□□ -0.28
COL6A1-201ENST00000361866 ZNF300Q96RE9 604 aaPredicted RBP13.33□□□□□ -0.28
COL6A1-201ENST00000361866 P2RY13Q9BPV8 354 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 NMNAT1Q9HAN9 279 aaPredicted RBP13.33□□□□□ -0.28
COL6A1-201ENST00000361866 NHSL1Q5SYE7 1610 aa13.33□□□□□ -0.28
COL6A1-201ENST00000361866 FAM47E-STBD1D6RA91 191 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 FAM227AF5H4B4 570 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 GALTP07902 379 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 MAPK9P45984 424 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 CAV3P56539 151 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 RFLNAQ6ZTI6 216 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 ZNF655Q8N720 491 aaPredicted RBP13.32□□□□□ -0.28
COL6A1-201ENST00000361866 FOXJ1Q92949 421 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 PPP1R16AQ96I34 528 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 OR5M11Q96RB7 305 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 CPPED1Q9BRF8 314 aaPredicted RBP13.32□□□□□ -0.28
COL6A1-201ENST00000361866 IKZF2Q9UKS7 526 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 NCKAP1Q9Y2A7 1128 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 TMEM98Q9Y2Y6 226 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 MEIOCA2RUB1 952 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 GABRR3A8MPY1 467 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 WASH4PA8MWX3 477 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 ERI3O43414 337 aaKnown RBP13.32□□□□□ -0.28
COL6A1-201ENST00000361866 OR10H2O60403 315 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 ENTPD6O75354 484 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 CDK1P06493 297 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 MMP2P08253 660 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 SLC10A3P09131 477 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 CCR7P32248 378 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 GGT2P36268 569 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 PSMD8P48556 350 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 ZNF311Q5JNZ3 666 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 PLPP4Q5VZY2 271 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 POMZP3Q6PJE2 187 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 DENND6BQ8NEG7 585 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 OR7G3Q8NG95 312 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 J3QLW9 94 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 SCAMP2O15127 329 aaKnown RBP13.32□□□□□ -0.28
COL6A1-201ENST00000361866 PRMT3O60678 531 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 ZNF19P17023 458 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 YBX1P67809 324 aaKnown RBP13.32□□□□□ -0.28
COL6A1-201ENST00000361866 CATSPEREQ5SY80 951 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 LIPJQ5W064 366 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 TOMM5Q8N4H5 51 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 OR6C4Q8NGE1 309 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 NELL2Q99435 816 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 C17orf62Q9BQA9 187 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 PDCD10Q9BUL8 212 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 ABCG5Q9H222 651 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 OR10H1Q9Y4A9 318 aa13.32□□□□□ -0.28
COL6A1-201ENST00000361866 JRKO75564 520 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 PRAMEF12O95522 483 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 ADH1AP07327 375 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 JUNBP17275 347 aaPredicted RBP13.31□□□□□ -0.28
COL6A1-201ENST00000361866 ACSL1P33121 698 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 CASP3P42574 277 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 PRR5P85299 388 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 LARS2Q15031 903 aaKnown RBP13.31□□□□□ -0.28
COL6A1-201ENST00000361866 CRTC1Q6UUV9 634 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 FRRS1Q6ZNA5 592 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 COMMD6Q7Z4G1 85 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 OR6K6Q8NGW6 343 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 SLC5A11Q8WWX8 675 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 OR8D1Q8WZ84 308 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 TFGQ92734 400 aaPredicted RBP13.31□□□□□ -0.28
COL6A1-201ENST00000361866 F2RL3Q96RI0 385 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 SECISBP2Q96T21 854 aaKnown RBP13.31□□□□□ -0.28
COL6A1-201ENST00000361866 ITM2BQ9Y287 266 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 RWDD3Q9Y3V2 267 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 TCRBV5S2A0A599 114 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 FAM25EA8MYX2 175 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 CPNE6O95741 557 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 MRPL3P09001 348 aaKnown RBP13.31□□□□□ -0.28
COL6A1-201ENST00000361866 PCSK2P16519 638 aa13.31□□□□□ -0.28
COL6A1-201ENST00000361866 AMD1P17707 334 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms