RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 GALEQ14376 348 aa15.33■□□□□ 0.05
CLSTN1-201ENST00000361311 MOSPD2Q8NHP6 518 aa15.33■□□□□ 0.05
CLSTN1-201ENST00000361311 PLD4Q96BZ4 506 aa15.33■□□□□ 0.05
CLSTN1-201ENST00000361311 KANTRA0A1W2PQU2 76 aa15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 NUPL2O15504 423 aaKnown RBP15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 PI15O43692 258 aa15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 CYP17A1P05093 508 aa15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 CSKP41240 450 aa15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 BIKQ13323 160 aa15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 SF3A2Q15428 464 aaKnown RBP15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 ESCO2Q56NI9 601 aa15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 CBLL1Q75N03 491 aa15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 ZNF467Q7Z7K2 595 aaPredicted RBP15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 RBM23Q86U06 439 aaKnown RBP15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 MBOAT4Q96T53 435 aa15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 OR51I1Q9H343 314 aa15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 DUSP21Q9H596 190 aa15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 CLMPQ9H6B4 373 aa15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 TAS2R10Q9NYW0 307 aa15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 LOC105369274A0A096LPK9 316 aa15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 A0A0G2JN53 185 aa15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 SDC1P18827 310 aa15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 PRPF38BQ5VTL8 546 aaKnown RBP15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 KRT77Q7Z794 578 aa15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 OR4N4Q8N0Y3 316 aa15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 SLC35B4Q969S0 331 aa15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 RIPOR3Q96MK2 946 aa15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 NMNAT1Q9HAN9 279 aaPredicted RBP15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 TCF7L1Q9HCS4 588 aa15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 COL14A1Q05707 1796 aaKnown RBP15.33■□□□□ 0.04
CLSTN1-201ENST00000361311 TRIM3O75382 744 aaPredicted RBP15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 ALPPP05187 535 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 RAB8AP61006 207 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 CTF1Q16619 201 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 CACUL1Q86Y37 369 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 UBQLNLQ8IYU4 475 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 TMIEQ8NEW7 156 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 TRIB3Q96RU7 358 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 ARL6Q9H0F7 186 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 STARD7Q9NQZ5 370 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 TCRBV5S2A0A599 114 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 SLC38A8A6NNN8 435 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 PDCD5O14737 125 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 SYN3O14994 580 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 SLC35G4P0C7Q5 338 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 OSMP13725 252 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 ALAS2P22557 587 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 ARNTP27540 789 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 GBX2P52951 348 aaPredicted RBP15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 MLLT1Q03111 559 aaPredicted RBP15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 ZMIZ2Q8NF64 920 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 NXPE2Q96DL1 559 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 C16orf70Q9BSU1 422 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 TMEM27Q9HBJ8 222 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 PRRC2BQ5JSZ5 2229 aaKnown RBP15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 PROM1O43490 865 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 PRAMEF12O95522 483 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 IL32P24001 234 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 CBX2Q14781 532 aaPredicted RBP15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 RGNQ15493 299 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 LIPJQ5W064 366 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 NADSYN1Q6IA69 706 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 SPNS2Q8IVW8 549 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 ENTHD1Q8IYW4 607 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 SYNPOQ8N3V7 929 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 EGLN2Q96KS0 407 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 CPPED1Q9BRF8 314 aaPredicted RBP15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 ACTR6Q9GZN1 396 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 MGAT4CQ9UBM8 478 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 UPB1Q9UBR1 384 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 ANKRD36CQ5JPF3 1778 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 DDX60Q8IY21 1712 aaKnown RBP15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 A0A0G2JLL6 359 aaPredicted RBP15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 TARM1B6A8C7 271 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 MEN1O00255 615 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 OR1F1O43749 312 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 POP4O95707 220 aaKnown RBP15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 ATP1B2P14415 290 aaPredicted RBP15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 JUPP14923 745 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 CAMK1Q14012 370 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 RTL4Q6ZR62 310 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 PRRT2Q7Z6L0 340 aaPredicted RBP15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 OR8K5Q8NH50 307 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 ACOT12Q8WYK0 555 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 HRASLS5Q96KN8 279 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 NANSQ9NR45 359 aa15.32■□□□□ 0.04
CLSTN1-201ENST00000361311 E2F3O00716 465 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 PCDHGA12O60330 932 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 TIA1P31483 386 aaKnown RBP eCLIP15.31■□□□□ 0.043e-10■■■■■ 38.8
CLSTN1-201ENST00000361311 WNT4P56705 351 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 SOWAHCQ53LP3 525 aaPredicted RBP15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 FKBP14Q9NWM8 211 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 TAS2R16Q9NYV7 291 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 TAS2R3Q9NYW6 316 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 ALG5Q9Y673 324 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 ARPC4-TTLL3A0A0A6YYG9 625 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 OR2AT4A6NND4 320 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 PAHP00439 452 aa15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 ZNF10P21506 573 aaPredicted RBP15.31■□□□□ 0.04
CLSTN1-201ENST00000361311 ST3GAL3Q11203 375 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms