RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 ERV3-1Q14264 604 aa19.49■□□□□ 0.71
CDC42BPB-201ENST00000361246 FGL2Q14314 439 aa19.49■□□□□ 0.71
CDC42BPB-201ENST00000361246 TMCO6Q96DC7 493 aa19.49■□□□□ 0.71
CDC42BPB-201ENST00000361246 CGREF1Q99674 301 aa19.49■□□□□ 0.71
CDC42BPB-201ENST00000361246 BEX2Q9BXY8 128 aa19.49■□□□□ 0.71
CDC42BPB-201ENST00000361246 C1orf21Q9H246 121 aa19.49■□□□□ 0.71
CDC42BPB-201ENST00000361246 RPF2Q9H7B2 306 aaKnown RBP19.49■□□□□ 0.71
CDC42BPB-201ENST00000361246 BEX1Q9HBH7 125 aa19.49■□□□□ 0.71
CDC42BPB-201ENST00000361246 PISDQ9UG56 409 aa19.49■□□□□ 0.71
CDC42BPB-201ENST00000361246 ACSL6Q9UKU0 697 aa19.49■□□□□ 0.71
CDC42BPB-201ENST00000361246 OR52A4PA6NMU1 304 aa19.49■□□□□ 0.71
CDC42BPB-201ENST00000361246 H2BFMP0C1H6 154 aa19.49■□□□□ 0.71
CDC42BPB-201ENST00000361246 DNAJA1P31689 397 aaKnown RBP19.49■□□□□ 0.71
CDC42BPB-201ENST00000361246 PON3Q15166 354 aa19.49■□□□□ 0.71
CDC42BPB-201ENST00000361246 POLE3Q9NRF9 147 aa19.49■□□□□ 0.71
CDC42BPB-201ENST00000361246 CXXC1Q9P0U4 656 aaPredicted RBP19.49■□□□□ 0.71
CDC42BPB-201ENST00000361246 EIF3KQ9UBQ5 218 aaKnown RBP19.49■□□□□ 0.71
CDC42BPB-201ENST00000361246 SARDHQ9UL12 918 aa19.49■□□□□ 0.71
CDC42BPB-201ENST00000361246 YARS2Q9Y2Z4 477 aaKnown RBP19.49■□□□□ 0.71
CDC42BPB-201ENST00000361246 FOXN2P32314 431 aa19.49■□□□□ 0.71
CDC42BPB-201ENST00000361246 ZNF763Q0D2J5 394 aa19.49■□□□□ 0.71
CDC42BPB-201ENST00000361246 SLC35G1Q2M3R5 365 aa19.49■□□□□ 0.71
CDC42BPB-201ENST00000361246 RNF220Q5VTB9 566 aa19.49■□□□□ 0.71
CDC42BPB-201ENST00000361246 PQLC3Q8N755 202 aa19.49■□□□□ 0.71
CDC42BPB-201ENST00000361246 DLX2Q07687 328 aaPredicted RBP19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 TP53INP2Q8IXH6 220 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 LAS2Q8IYD9 372 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 CNEP1R1Q8N9A8 125 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 MRGPRX2Q96LB1 330 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 OAZ3Q9UMX2 235 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 SMCO3A2RU48 225 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 ISPDA4D126 451 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 ACOT7O00154 380 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 AK4P27144 223 aaPredicted RBP19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 RPS3AP61247 264 aaKnown RBP19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 PLEKHS1Q5SXH7 462 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 EEF1A1P5Q5VTE0 462 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 FIGLAQ6QHK4 219 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 LRCH3Q96II8 777 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 COQ4Q9Y3A0 265 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 RORCP51449 518 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 EEFSECP57772 596 aaKnown RBP19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 BICRALQ6AI39 1079 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 LRFN4Q6PJG9 635 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 SPRYD4Q8WW59 207 aaPredicted RBP19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 ZNF701Q9NV72 531 aaPredicted RBP19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 PCDH10Q9P2E7 1040 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 IL20RAQ9UHF4 553 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 FBXO9Q9UK97 447 aaPredicted RBP19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 RPL36Q9Y3U8 105 aaKnown RBP19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 GGT2P36268 569 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 FOXR2Q6PJQ5 311 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 TMEM139Q8IV31 216 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 PYURFQ96I23 114 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 GSRP00390 522 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 CATSPEREQ5SY80 951 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 ZNF765Q7L2R6 523 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 GPALPP1Q8IXQ4 340 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 CREB3L4Q8TEY5 395 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 DAZLQ92904 295 aaKnown RBP19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 RAB7BQ96AH8 199 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 TSGA13Q96PP4 275 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 TRPV4Q9HBA0 871 aa19.48■□□□□ 0.71
CDC42BPB-201ENST00000361246 TRMUO75648 421 aaKnown RBP19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 GBX1Q14549 363 aa19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 C2CD4AQ8NCU7 369 aaPredicted RBP19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 REEP4Q9H6H4 257 aa19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 PSAT1Q9Y617 370 aa19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 SOCS5O75159 536 aa19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 VAMP1P23763 118 aa19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 HOXD13P35453 343 aa19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 FOLR3P41439 243 aa19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 RABL3Q5HYI8 236 aa19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 TAS2R7Q9NYW3 318 aa19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 ZNF888P0CJ79 500 aaPredicted RBP19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 KHDC1Q4VXA5 237 aaKnown RBP19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 ALG10Q5BKT4 473 aa19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 SLC25A25Q6KCM7 469 aa19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 C10orf82Q8WW14 230 aa19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 SOX17Q9H6I2 414 aaPredicted RBP19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 REV1Q9UBZ9 1251 aa19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 CDKN2DP55273 166 aa19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 DPY19L1Q2PZI1 675 aa19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 CYBRD1Q53TN4 286 aa19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 GPR137CQ8N3F9 429 aa19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 OR13C3Q8NGS6 347 aa19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 ZNF678Q5SXM1 525 aa19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 VHLLQ6RSH7 139 aa19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 CANT1Q8WVQ1 401 aa19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 PITX2Q99697 317 aa19.47■□□□□ 0.71
CDC42BPB-201ENST00000361246 TEX46H3BTG2 121 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 CNMDO75829 334 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 GSTT2BP0CG30 244 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 C1GALT1C1LP0DN25 315 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 CKMT2P17540 419 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 EPHA4P54764 986 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 C3orf38Q5JPI3 329 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 POMPQ9Y244 141 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 NAV1Q8NEY1 1877 aa19.46■□□□□ 0.71
CDC42BPB-201ENST00000361246 ATE1O95260 518 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms