RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 ADH5P11766 374 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 GNSP15586 552 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 PMS2P3Q13401 168 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 FAM189A2Q15884 450 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 ITPRIPL2Q3MIP1 535 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 ZNF860A6NHJ4 632 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 IRAK2O43187 625 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 LRIT3Q3SXY7 679 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 CCDC116Q8IYX3 515 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 POC1BQ8TC44 478 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 CD244Q9BZW8 370 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 EBF1Q9UH73 591 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 MGAT4BQ9UQ53 548 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 HMX3A6NHT5 357 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 SSX4O60224 188 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 IL3P08700 152 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 ZNF35P13682 527 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 FASLGP48023 281 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 ZNF678Q5SXM1 525 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 FBXL22Q6P050 247 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 C12orf40Q86WS4 652 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 PSD4Q8NDX1 1056 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 THAP3Q8WTV1 239 aaPredicted RBP15.45■□□□□ 0.06
COL18A1-203ENST00000359759 XPNPEP1Q9NQW7 623 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 TAS2R9Q9NYW1 312 aa15.45■□□□□ 0.06
COL18A1-203ENST00000359759 MOGSQ13724 837 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 TRAM2Q15035 370 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 SFRP4Q6FHJ7 346 aaPredicted RBP15.44■□□□□ 0.06
COL18A1-203ENST00000359759 CARM1Q86X55 608 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 WDR45Q9Y484 360 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 HS3ST4Q9Y661 456 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.44■□□□□ 0.06
COL18A1-203ENST00000359759 HCRTO43612 131 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 CBSLP0DN79 551 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 CHMP24386 653 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 CBSP35520 551 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 UGT2B10P36537 528 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 MAGEA6P43360 314 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 TMEM225Q6GV28 225 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 CTU1Q7Z7A3 348 aaKnown RBP15.44■□□□□ 0.06
COL18A1-203ENST00000359759 RPLP0P6Q8NHW5 317 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 NELL2Q99435 816 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 KIAA0513O60268 411 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 CD3GP09693 182 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 S1PR1P21453 382 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 GDI1P31150 447 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 ARSFP54793 590 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 CTC1Q2NKJ3 1217 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 PRRT3Q5FWE3 981 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 ASRGL1Q7L266 308 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 KLBQ86Z14 1044 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 NIPA2Q8N8Q9 360 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 MOCOSQ96EN8 888 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 NSUN3Q9H649 340 aaKnown RBP15.44■□□□□ 0.06
COL18A1-203ENST00000359759 FAM120CQ9NX05 1096 aaKnown RBP15.44■□□□□ 0.06
COL18A1-203ENST00000359759 OR6C6A6NF89 314 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 H0YJX3 145 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 SLC16A8O95907 504 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 IFNGR1P15260 489 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 RAB4AP20338 218 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 CAMLGP49069 296 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 DPY19L4Q7Z388 723 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 TSTD1Q8NFU3 115 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 SLC29A3Q9BZD2 475 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 SRRDQ9UH36 339 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 DLGAP4Q9Y2H0 992 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 RGS9O75916 674 aaPredicted RBP15.44■□□□□ 0.06
COL18A1-203ENST00000359759 FUT2Q10981 343 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 SCLYQ96I15 445 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 OR8D2Q9GZM6 311 aa15.44■□□□□ 0.06
COL18A1-203ENST00000359759 UNC119BA6NIH7 251 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 HEXBP07686 556 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 FHP07954 510 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 HNRNPKP61978 463 aaKnown RBP eCLIP15.43■□□□□ 0.062e-7■■■■□ 20.9
COL18A1-203ENST00000359759 NNATQ16517 81 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 TMIGD1Q6UXZ0 262 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 FBXL18Q96ME1 805 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 MMP27Q9H306 513 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 CLEC4EQ9ULY5 219 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 PCDHGA6Q9Y5G7 932 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 PTGDR2Q9Y5Y4 395 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 TMEM88BA6NKF7 163 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 GABRA3P34903 492 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 KCNQ1P51787 676 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 ZNF630Q2M218 657 aaPredicted RBP15.43■□□□□ 0.06
COL18A1-203ENST00000359759 PDSS1Q5T2R2 415 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 PLD6Q8N2A8 252 aaKnown RBP15.43■□□□□ 0.06
COL18A1-203ENST00000359759 ZNF514Q96K75 400 aaPredicted RBP15.43■□□□□ 0.06
COL18A1-203ENST00000359759 SMG9Q9H0W8 520 aaKnown RBP15.43■□□□□ 0.06
COL18A1-203ENST00000359759 ZNF254O75437 659 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 OGDHQ02218 1023 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 TFGQ92734 400 aaPredicted RBP15.43■□□□□ 0.06
COL18A1-203ENST00000359759 OR2B2Q9GZK3 357 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 DERL2Q9GZP9 239 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 MTG2Q9H4K7 406 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 BCAS3Q9H6U6 928 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 SRA1Q9HD15 236 aaKnown RBP15.43■□□□□ 0.06
COL18A1-203ENST00000359759 ICKQ9UPZ9 632 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 PCDHB11Q9Y5F2 797 aa15.43■□□□□ 0.06
COL18A1-203ENST00000359759 FMO6PO60774 539 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms