RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 BCKDHAP12694 445 aa14.38□□□□□ -0.11
TPM1-206ENST00000358278 ACPPP15309 386 aa14.38□□□□□ -0.11
TPM1-206ENST00000358278 SDC1P18827 310 aa14.38□□□□□ -0.11
TPM1-206ENST00000358278 IL10P22301 178 aa14.38□□□□□ -0.11
TPM1-206ENST00000358278 GSTM5P46439 218 aa14.38□□□□□ -0.11
TPM1-206ENST00000358278 TRA2BP62995 288 aaKnown RBP14.38□□□□□ -0.11
TPM1-206ENST00000358278 TGIF1Q15583 401 aa14.38□□□□□ -0.11
TPM1-206ENST00000358278 NKG7Q16617 165 aa14.38□□□□□ -0.11
TPM1-206ENST00000358278 LSM12Q3MHD2 195 aaKnown RBP14.38□□□□□ -0.11
TPM1-206ENST00000358278 NDUFAF5Q5TEU4 345 aa14.38□□□□□ -0.11
TPM1-206ENST00000358278 OGFOD2Q6N063 350 aa14.38□□□□□ -0.11
TPM1-206ENST00000358278 MRPL14Q6P1L8 145 aaKnown RBP14.38□□□□□ -0.11
TPM1-206ENST00000358278 SHISA6Q6ZSJ9 500 aa14.38□□□□□ -0.11
TPM1-206ENST00000358278 ZC3H7AQ8IWR0 971 aaKnown RBP14.38□□□□□ -0.11
TPM1-206ENST00000358278 SHISA5Q8N114 240 aa14.38□□□□□ -0.11
TPM1-206ENST00000358278 TMEM132CQ8N3T6 1108 aa14.38□□□□□ -0.11
TPM1-206ENST00000358278 C16orf78Q8WTQ4 265 aa14.38□□□□□ -0.11
TPM1-206ENST00000358278 NAF1Q96HR8 494 aaKnown RBP14.38□□□□□ -0.11
TPM1-206ENST00000358278 TSSK3Q96PN8 268 aa14.38□□□□□ -0.11
TPM1-206ENST00000358278 CSF3RQ99062 836 aa14.38□□□□□ -0.11
TPM1-206ENST00000358278 FAIM2Q9BWQ8 316 aa14.38□□□□□ -0.11
TPM1-206ENST00000358278 TMEM120AQ9BXJ8 343 aa14.38□□□□□ -0.11
TPM1-206ENST00000358278 SOX17Q9H6I2 414 aaPredicted RBP14.38□□□□□ -0.11
TPM1-206ENST00000358278 WDR54Q9H977 334 aa14.38□□□□□ -0.11
TPM1-206ENST00000358278 GPN2Q9H9Y4 310 aaPredicted RBP14.38□□□□□ -0.11
TPM1-206ENST00000358278 WDR41Q9HAD4 459 aa14.38□□□□□ -0.11
TPM1-206ENST00000358278 KCMF1Q9P0J7 381 aa14.38□□□□□ -0.11
TPM1-206ENST00000358278 KLHL14Q9P2G3 628 aa14.38□□□□□ -0.11
TPM1-206ENST00000358278 LOC101059948A0A1B0GTJ6 334 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 E9PBE3 544 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 FAM227AF5H4B4 570 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 PROM1O43490 865 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 KLHL41O60662 606 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 B4GALT2O60909 372 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 JRKO75564 520 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 AIFM1O95831 613 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 IL3P08700 152 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 RAB40ALP0C0E4 278 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 ASMTP46597 345 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 ALDH9A1P49189 494 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 ARFIP2P53365 341 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 DNASE1L3Q13609 305 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 ERV3-1Q14264 604 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 C18orf63Q68DL7 685 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 RIPOR1Q6ZS17 1223 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 SPATA19Q7Z5L4 167 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 PARP9Q8IXQ6 854 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 ZNF248Q8NDW4 579 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 KCNE4Q8WWG9 221 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 TM4SF18Q96CE8 201 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 CCDC28BQ9BUN5 200 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 TGIF2Q9GZN2 237 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 KCNK13Q9HB14 408 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 MYNNQ9NPC7 610 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 DKK4Q9UBT3 224 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 KCND3Q9UK17 655 aa14.37□□□□□ -0.11
TPM1-206ENST00000358278 PTRH2Q9Y3E5 179 aaKnown RBP14.37□□□□□ -0.11
TPM1-206ENST00000358278 A0A1W2PR48 441 aa14.36□□□□□ -0.11
TPM1-206ENST00000358278 CLDN4O14493 209 aa14.36□□□□□ -0.11
TPM1-206ENST00000358278 TLX3O43711 291 aaPredicted RBP14.36□□□□□ -0.11
TPM1-206ENST00000358278 SHOX2O60902 331 aaPredicted RBP14.36□□□□□ -0.11
TPM1-206ENST00000358278 PRKRAO75569 313 aaKnown RBP14.36□□□□□ -0.11
TPM1-206ENST00000358278 ALDOCP09972 364 aaKnown RBP14.36□□□□□ -0.11
TPM1-206ENST00000358278 PRPS2P11908 318 aa14.36□□□□□ -0.11
TPM1-206ENST00000358278 DRD4P21917 467 aa14.36□□□□□ -0.11
TPM1-206ENST00000358278 TACR1P25103 407 aa14.36□□□□□ -0.11
TPM1-206ENST00000358278 FOLR3P41439 243 aa14.36□□□□□ -0.11
TPM1-206ENST00000358278 DIO3P55073 304 aa14.36□□□□□ -0.11
TPM1-206ENST00000358278 FOXL2P58012 376 aa14.36□□□□□ -0.11
TPM1-206ENST00000358278 KLC1Q07866 573 aa14.36□□□□□ -0.11
TPM1-206ENST00000358278 PTGR1Q14914 329 aa14.36□□□□□ -0.11
TPM1-206ENST00000358278 HEPACAMQ14CZ8 416 aa14.36□□□□□ -0.11
TPM1-206ENST00000358278 IKBIPQ70UQ0 350 aa14.36□□□□□ -0.11
TPM1-206ENST00000358278 CLHC1Q8NHS4 586 aa14.36□□□□□ -0.11
TPM1-206ENST00000358278 SNIP1Q8TAD8 396 aaKnown RBP14.36□□□□□ -0.11
TPM1-206ENST00000358278 STON2Q8WXE9 905 aa14.36□□□□□ -0.11
TPM1-206ENST00000358278 MARK4Q96L34 752 aa14.36□□□□□ -0.11
TPM1-206ENST00000358278 SPSB2Q99619 263 aa14.36□□□□□ -0.11
TPM1-206ENST00000358278 ELAC2Q9BQ52 826 aaKnown RBP14.36□□□□□ -0.11
TPM1-206ENST00000358278 GPR87Q9BY21 358 aa14.36□□□□□ -0.11
TPM1-206ENST00000358278 EPN3Q9H201 632 aa14.36□□□□□ -0.11
TPM1-206ENST00000358278 RABEP2Q9H5N1 569 aa14.36□□□□□ -0.11
TPM1-206ENST00000358278 RPF2Q9H7B2 306 aaKnown RBP14.36□□□□□ -0.11
TPM1-206ENST00000358278 ASIC5Q9NY37 505 aa14.36□□□□□ -0.11
TPM1-206ENST00000358278 BAIAP2L1Q9UHR4 511 aa14.36□□□□□ -0.11
TPM1-206ENST00000358278 MKL2Q9ULH7 1088 aa14.36□□□□□ -0.11
TPM1-206ENST00000358278 NUP214P35658 2090 aaPredicted RBP14.36□□□□□ -0.11
TPM1-206ENST00000358278 LAMA5O15230 3695 aa14.36□□□□□ -0.11
TPM1-206ENST00000358278 BLACEA4D250 179 aa14.35□□□□□ -0.11
TPM1-206ENST00000358278 GLOD5A6NK44 160 aa14.35□□□□□ -0.11
TPM1-206ENST00000358278 VSTM2BA6NLU5 285 aa14.35□□□□□ -0.11
TPM1-206ENST00000358278 CYR61O00622 381 aa14.35□□□□□ -0.11
TPM1-206ENST00000358278 UBDO15205 165 aa14.35□□□□□ -0.11
TPM1-206ENST00000358278 CNOT3O75175 753 aaKnown RBP14.35□□□□□ -0.11
TPM1-206ENST00000358278 G6PDP11413 515 aa14.35□□□□□ -0.11
TPM1-206ENST00000358278 PTPN4P29074 926 aa14.35□□□□□ -0.11
TPM1-206ENST00000358278 RPS18P62269 152 aaKnown RBP14.35□□□□□ -0.11
TPM1-206ENST00000358278 C2orf80Q0P641 193 aa14.35□□□□□ -0.11
TPM1-206ENST00000358278 SLC13A2Q13183 592 aa14.35□□□□□ -0.11
TPM1-206ENST00000358278 CLN3Q13286 438 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms