RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 GPR179Q6PRD1 2367 aa16.15■□□□□ 0.18
TPM1-205ENST00000357980 TXNDC9O14530 226 aa16.15■□□□□ 0.18
TPM1-205ENST00000357980 B3GALT2O43825 422 aa16.15■□□□□ 0.18
TPM1-205ENST00000357980 GALR3O60755 368 aaPredicted RBP16.15■□□□□ 0.18
TPM1-205ENST00000357980 PSMG1O95456 288 aa16.15■□□□□ 0.18
TPM1-205ENST00000357980 C1QCP02747 245 aa16.15■□□□□ 0.18
TPM1-205ENST00000357980 IL1RNP18510 177 aa16.15■□□□□ 0.18
TPM1-205ENST00000357980 HTR1EP28566 365 aa16.15■□□□□ 0.18
TPM1-205ENST00000357980 NUBP1P53384 320 aa16.15■□□□□ 0.18
TPM1-205ENST00000357980 ATXN3P54252 364 aaPredicted RBP16.15■□□□□ 0.18
TPM1-205ENST00000357980 SLC14A1Q13336 389 aa16.15■□□□□ 0.18
TPM1-205ENST00000357980 C18orf63Q68DL7 685 aa16.15■□□□□ 0.18
TPM1-205ENST00000357980 ZNF621Q6ZSS3 439 aa16.15■□□□□ 0.18
TPM1-205ENST00000357980 IFNEQ86WN2 208 aa16.15■□□□□ 0.18
TPM1-205ENST00000357980 C10orf111Q8N326 155 aa16.15■□□□□ 0.18
TPM1-205ENST00000357980 BHLHE22Q8NFJ8 381 aaPredicted RBP16.15■□□□□ 0.18
TPM1-205ENST00000357980 NAT6Q93015 286 aa16.15■□□□□ 0.18
TPM1-205ENST00000357980 STMN2Q93045 179 aa16.15■□□□□ 0.18
TPM1-205ENST00000357980 ECSITQ9BQ95 431 aa16.15■□□□□ 0.18
TPM1-205ENST00000357980 NUDT22Q9BRQ3 303 aa16.15■□□□□ 0.18
TPM1-205ENST00000357980 DCLRE1BQ9H816 532 aa16.15■□□□□ 0.18
TPM1-205ENST00000357980 PRDM4Q9UKN5 801 aa16.15■□□□□ 0.18
TPM1-205ENST00000357980 CES1P1Q9UKY3 287 aa16.15■□□□□ 0.18
TPM1-205ENST00000357980 RALGAPA1Q6GYQ0 2036 aa16.14■□□□□ 0.17
TPM1-205ENST00000357980 A0A1W2PRB8 838 aa16.14■□□□□ 0.17
TPM1-205ENST00000357980 CPED1A4D0V7 1026 aa16.14■□□□□ 0.17
TPM1-205ENST00000357980 WASHC1A8K0Z3 465 aa16.14■□□□□ 0.17
TPM1-205ENST00000357980 CLIC1O00299 241 aa16.14■□□□□ 0.17
TPM1-205ENST00000357980 PGRMC2O15173 223 aa16.14■□□□□ 0.17
TPM1-205ENST00000357980 PDPK1O15530 556 aa16.14■□□□□ 0.17
TPM1-205ENST00000357980 GZMMP51124 257 aa16.14■□□□□ 0.17
TPM1-205ENST00000357980 LIM2P55344 173 aa16.14■□□□□ 0.17
TPM1-205ENST00000357980 OR4D2P58180 307 aa16.14■□□□□ 0.17
TPM1-205ENST00000357980 HSD11B2P80365 405 aa16.14■□□□□ 0.17
TPM1-205ENST00000357980 RUNX2Q13950 521 aa16.14■□□□□ 0.17
TPM1-205ENST00000357980 PROX2Q3B8N5 592 aa16.14■□□□□ 0.17
TPM1-205ENST00000357980 CALHM3Q86XJ0 350 aa16.14■□□□□ 0.17
TPM1-205ENST00000357980 ENDOVQ8N8Q3 282 aaKnown RBP16.14■□□□□ 0.17
TPM1-205ENST00000357980 HIPK4Q8NE63 616 aa16.14■□□□□ 0.17
TPM1-205ENST00000357980 OR10A6Q8NH74 314 aa16.14■□□□□ 0.17
TPM1-205ENST00000357980 EXOSC8Q96B26 276 aaKnown RBP16.14■□□□□ 0.17
TPM1-205ENST00000357980 SLC41A2Q96JW4 573 aa16.14■□□□□ 0.17
TPM1-205ENST00000357980 ZMYND15Q9H091 742 aa16.14■□□□□ 0.17
TPM1-205ENST00000357980 RASSF4Q9H2L5 321 aa16.14■□□□□ 0.17
TPM1-205ENST00000357980 MUC13Q9H3R2 512 aa16.14■□□□□ 0.17
TPM1-205ENST00000357980 LYRM4Q9HD34 91 aa16.14■□□□□ 0.17
TPM1-205ENST00000357980 ENAMQ9NRM1 1142 aa16.14■□□□□ 0.17
TPM1-205ENST00000357980 TAS2R9Q9NYW1 312 aa16.14■□□□□ 0.17
TPM1-205ENST00000357980 NKX1-2Q9UD57 310 aaPredicted RBP16.14■□□□□ 0.17
TPM1-205ENST00000357980 ZNF282Q9UDV7 671 aaPredicted RBP16.14■□□□□ 0.17
TPM1-205ENST00000357980 PHF11Q9UIL8 331 aa16.14■□□□□ 0.17
TPM1-205ENST00000357980 DAPP1Q9UN19 280 aa16.14■□□□□ 0.17
TPM1-205ENST00000357980 VPS4AQ9UN37 437 aa16.14■□□□□ 0.17
TPM1-205ENST00000357980 GLOD5A6NK44 160 aa16.13■□□□□ 0.17
TPM1-205ENST00000357980 KHNYNO15037 678 aaKnown RBP16.13■□□□□ 0.17
TPM1-205ENST00000357980 NVLO15381 856 aaKnown RBP16.13■□□□□ 0.17
TPM1-205ENST00000357980 DNAJB6O75190 326 aa16.13■□□□□ 0.17
TPM1-205ENST00000357980 LMNAP02545 664 aaKnown RBP16.13■□□□□ 0.17
TPM1-205ENST00000357980 ZNF883P0CG24 379 aa16.13■□□□□ 0.17
TPM1-205ENST00000357980 NR2F6P10588 404 aa16.13■□□□□ 0.17
TPM1-205ENST00000357980 CKMT1AP12532 417 aa16.13■□□□□ 0.17
TPM1-205ENST00000357980 TNFRSF17Q02223 184 aa16.13■□□□□ 0.17
TPM1-205ENST00000357980 KCNAB1Q14722 419 aa16.13■□□□□ 0.17
TPM1-205ENST00000357980 SLC48A1Q6P1K1 146 aa16.13■□□□□ 0.17
TPM1-205ENST00000357980 ZNF551Q7Z340 670 aaPredicted RBP16.13■□□□□ 0.17
TPM1-205ENST00000357980 TMPRSS9Q7Z410 1059 aa16.13■□□□□ 0.17
TPM1-205ENST00000357980 DHFR2Q86XF0 187 aa16.13■□□□□ 0.17
TPM1-205ENST00000357980 ZFP90Q8TF47 636 aa16.13■□□□□ 0.17
TPM1-205ENST00000357980 C10orf90Q96M02 699 aa16.13■□□□□ 0.17
TPM1-205ENST00000357980 PIF1Q9H611 641 aa16.13■□□□□ 0.17
TPM1-205ENST00000357980 TPT1P8Q9HAU6 139 aa16.13■□□□□ 0.17
TPM1-205ENST00000357980 SLC35C2Q9NQQ7 365 aa16.13■□□□□ 0.17
TPM1-205ENST00000357980 ACSS1Q9NUB1 689 aaPredicted RBP16.13■□□□□ 0.17
TPM1-205ENST00000357980 ACTR3BQ9P1U1 418 aa16.13■□□□□ 0.17
TPM1-205ENST00000357980 EGFL7Q9UHF1 273 aa16.13■□□□□ 0.17
TPM1-205ENST00000357980 BCAP29Q9UHQ4 241 aa16.13■□□□□ 0.17
TPM1-205ENST00000357980 UTS2RQ9UKP6 389 aa16.13■□□□□ 0.17
TPM1-205ENST00000357980 NAALAD2Q9Y3Q0 740 aa16.13■□□□□ 0.17
TPM1-205ENST00000357980 PCDHB3Q9Y5E6 796 aa16.13■□□□□ 0.17
TPM1-205ENST00000357980 CACNA1HO95180 2353 aa16.13■□□□□ 0.17
TPM1-205ENST00000357980 A0A1W2PQM1 296 aa16.12■□□□□ 0.17
TPM1-205ENST00000357980 ZNF860A6NHJ4 632 aa16.12■□□□□ 0.17
TPM1-205ENST00000357980 H3BMH7 237 aa16.12■□□□□ 0.17
TPM1-205ENST00000357980 ARPC2O15144 300 aa16.12■□□□□ 0.17
TPM1-205ENST00000357980 MED26O95402 600 aa16.12■□□□□ 0.17
TPM1-205ENST00000357980 ABCB1P08183 1280 aaPredicted RBP16.12■□□□□ 0.17
TPM1-205ENST00000357980 GPX2P18283 190 aa16.12■□□□□ 0.17
TPM1-205ENST00000357980 ATP6V1B2P21281 511 aa16.12■□□□□ 0.17
TPM1-205ENST00000357980 COL9A2Q14055 689 aaPredicted RBP16.12■□□□□ 0.17
TPM1-205ENST00000357980 MLC1Q15049 377 aa16.12■□□□□ 0.17
TPM1-205ENST00000357980 RCN1Q15293 331 aa16.12■□□□□ 0.17
TPM1-205ENST00000357980 SNCBQ16143 134 aa16.12■□□□□ 0.17
TPM1-205ENST00000357980 LCN8Q6JVE9 175 aa16.12■□□□□ 0.17
TPM1-205ENST00000357980 AAGABQ6PD74 315 aa16.12■□□□□ 0.17
TPM1-205ENST00000357980 KMT5CQ86Y97 462 aa16.12■□□□□ 0.17
TPM1-205ENST00000357980 D2HGDHQ8N465 521 aa16.12■□□□□ 0.17
TPM1-205ENST00000357980 SLC26A7Q8TE54 656 aa16.12■□□□□ 0.17
TPM1-205ENST00000357980 ZBED6CLQ96FA7 236 aaPredicted RBP16.12■□□□□ 0.17
TPM1-205ENST00000357980 PCDHGB4Q9UN71 923 aa16.12■□□□□ 0.17
TPM1-205ENST00000357980 SNX13Q9Y5W8 968 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms