RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 ANKRD26P1Q6NSI1 321 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 SHISA6Q6ZSJ9 500 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 ZC3H7AQ8IWR0 971 aaKnown RBP23.94■■□□□ 1.42
SSBP3-202ENST00000357475 PRSS58Q8IYP2 241 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 IFT80Q9P2H3 777 aaPredicted RBP23.94■■□□□ 1.42
SSBP3-202ENST00000357475 NEUROG3Q9Y4Z2 214 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 CROCCQ5TZA2 2017 aa23.94■■□□□ 1.42
SSBP3-202ENST00000357475 AHCTF1Q8WYP5 2266 aa23.93■■□□□ 1.42
SSBP3-202ENST00000357475 PGRMC2O15173 223 aa23.93■■□□□ 1.42
SSBP3-202ENST00000357475 RNH1P13489 461 aaKnown RBP23.93■■□□□ 1.42
SSBP3-202ENST00000357475 AGXTP21549 392 aa23.93■■□□□ 1.42
SSBP3-202ENST00000357475 KLC1Q07866 573 aa23.93■■□□□ 1.42
SSBP3-202ENST00000357475 C2orf80Q0P641 193 aa23.93■■□□□ 1.42
SSBP3-202ENST00000357475 MLIPQ5VWP3 458 aa23.93■■□□□ 1.42
SSBP3-202ENST00000357475 FAM180BQ6P0A1 224 aa23.93■■□□□ 1.42
SSBP3-202ENST00000357475 OVCH1Q7RTY7 1134 aa23.93■■□□□ 1.42
SSBP3-202ENST00000357475 LAPTM4BQ86VI4 370 aa23.93■■□□□ 1.42
SSBP3-202ENST00000357475 OR9I1Q8NGQ6 314 aa23.93■■□□□ 1.42
SSBP3-202ENST00000357475 BRINP2Q9C0B6 783 aa23.93■■□□□ 1.42
SSBP3-202ENST00000357475 PHF11Q9UIL8 331 aa23.93■■□□□ 1.42
SSBP3-202ENST00000357475 NDUFAB1O14561 156 aa23.92■■□□□ 1.42
SSBP3-202ENST00000357475 RAD1O60671 282 aa23.92■■□□□ 1.42
SSBP3-202ENST00000357475 B4GALT2O60909 372 aa23.92■■□□□ 1.42
SSBP3-202ENST00000357475 BMP10O95393 424 aa23.92■■□□□ 1.42
SSBP3-202ENST00000357475 ADRB1P08588 477 aa23.92■■□□□ 1.42
SSBP3-202ENST00000357475 TRA2BP62995 288 aaKnown RBP23.92■■□□□ 1.42
SSBP3-202ENST00000357475 UBAP2LQ14157 1087 aaKnown RBP23.92■■□□□ 1.42
SSBP3-202ENST00000357475 PAOXQ6QHF9 649 aa23.92■■□□□ 1.42
SSBP3-202ENST00000357475 TMEM132CQ8N3T6 1108 aa23.92■■□□□ 1.42
SSBP3-202ENST00000357475 TBC1D20Q96BZ9 403 aa23.92■■□□□ 1.42
SSBP3-202ENST00000357475 NXPE2Q96DL1 559 aa23.92■■□□□ 1.42
SSBP3-202ENST00000357475 NMUR2Q9GZQ4 415 aa23.92■■□□□ 1.42
SSBP3-202ENST00000357475 LANCL2Q9NS86 450 aa23.92■■□□□ 1.42
SSBP3-202ENST00000357475 PADI1Q9ULC6 663 aa23.92■■□□□ 1.42
SSBP3-202ENST00000357475 ARL2BPQ9Y2Y0 163 aa23.92■■□□□ 1.42
SSBP3-202ENST00000357475 MSRB2Q9Y3D2 182 aa23.92■■□□□ 1.42
SSBP3-202ENST00000357475 FRYQ5TBA9 3013 aa23.92■■□□□ 1.42
SSBP3-202ENST00000357475 A0A1W2PS29 197 aa23.91■■□□□ 1.42
SSBP3-202ENST00000357475 STMND1H3BQB6 276 aa23.91■■□□□ 1.42
SSBP3-202ENST00000357475 NR2F6P10588 404 aa23.91■■□□□ 1.42
SSBP3-202ENST00000357475 IDO1P14902 403 aa23.91■■□□□ 1.42
SSBP3-202ENST00000357475 IL12AP29459 219 aa23.91■■□□□ 1.42
SSBP3-202ENST00000357475 ALDH9A1P49189 494 aa23.91■■□□□ 1.42
SSBP3-202ENST00000357475 TGIF1Q15583 401 aa23.91■■□□□ 1.42
SSBP3-202ENST00000357475 GKAP1Q5VSY0 366 aaPredicted RBP23.91■■□□□ 1.42
SSBP3-202ENST00000357475 MRPL14Q6P1L8 145 aaKnown RBP23.91■■□□□ 1.42
SSBP3-202ENST00000357475 RIMKLAQ8IXN7 391 aa23.91■■□□□ 1.42
SSBP3-202ENST00000357475 STT3BQ8TCJ2 826 aa23.91■■□□□ 1.42
SSBP3-202ENST00000357475 CT55Q8WUE5 264 aa23.91■■□□□ 1.42
SSBP3-202ENST00000357475 DPH2Q9BQC3 489 aaPredicted RBP23.91■■□□□ 1.42
SSBP3-202ENST00000357475 CLK4Q9HAZ1 481 aaKnown RBP23.91■■□□□ 1.42
SSBP3-202ENST00000357475 SDR39U1Q9NRG7 319 aaPredicted RBP23.91■■□□□ 1.42
SSBP3-202ENST00000357475 ZNF282Q9UDV7 671 aaPredicted RBP23.91■■□□□ 1.42
SSBP3-202ENST00000357475 PCDHA9Q9Y5H5 950 aa23.91■■□□□ 1.42
SSBP3-202ENST00000357475 IGLV3-12A0A075B6K2 115 aa23.9■■□□□ 1.42
SSBP3-202ENST00000357475 FHP07954 510 aa23.9■■□□□ 1.42
SSBP3-202ENST00000357475 GPX3P22352 226 aa23.9■■□□□ 1.42
SSBP3-202ENST00000357475 CLDN8P56748 225 aa23.9■■□□□ 1.42
SSBP3-202ENST00000357475 BTG2P78543 158 aa23.9■■□□□ 1.42
SSBP3-202ENST00000357475 NKG7Q16617 165 aa23.9■■□□□ 1.42
SSBP3-202ENST00000357475 GSTA3Q16772 222 aa23.9■■□□□ 1.42
SSBP3-202ENST00000357475 ZNF385BQ569K4 471 aa23.9■■□□□ 1.42
SSBP3-202ENST00000357475 METTL21CQ5VZV1 264 aa23.9■■□□□ 1.42
SSBP3-202ENST00000357475 MTDHQ86UE4 582 aaKnown RBP23.9■■□□□ 1.42
SSBP3-202ENST00000357475 NLGN4XQ8N0W4 816 aa23.9■■□□□ 1.42
SSBP3-202ENST00000357475 NLGN4YQ8NFZ3 816 aaPredicted RBP23.9■■□□□ 1.42
SSBP3-202ENST00000357475 SOX17Q9H6I2 414 aaPredicted RBP23.9■■□□□ 1.42
SSBP3-202ENST00000357475 MKKSQ9NPJ1 570 aaPredicted RBP23.9■■□□□ 1.42
SSBP3-202ENST00000357475 SAR1AQ9NR31 198 aa23.9■■□□□ 1.42
SSBP3-202ENST00000357475 THSD1Q9NS62 852 aa23.9■■□□□ 1.42
SSBP3-202ENST00000357475 CACNA1AO00555 2505 aa23.89■■□□□ 1.42
SSBP3-202ENST00000357475 MYOCOSA0A1B0GUC4 107 aa23.89■■□□□ 1.42
SSBP3-202ENST00000357475 TGFBR3LH3BV60 316 aa23.89■■□□□ 1.42
SSBP3-202ENST00000357475 PSMD12O00232 456 aaPredicted RBP23.89■■□□□ 1.42
SSBP3-202ENST00000357475 FURINP09958 794 aa23.89■■□□□ 1.42
SSBP3-202ENST00000357475 ZGLP1P0C6A0 271 aa23.89■■□□□ 1.42
SSBP3-202ENST00000357475 CCNYL3P0C7X3 344 aa23.89■■□□□ 1.42
SSBP3-202ENST00000357475 ZFP36L2P47974 494 aaKnown RBP23.89■■□□□ 1.42
SSBP3-202ENST00000357475 ID2Q02363 134 aa23.89■■□□□ 1.42
SSBP3-202ENST00000357475 UGT8Q16880 541 aa23.89■■□□□ 1.42
SSBP3-202ENST00000357475 PDCD4Q53EL6 469 aaKnown RBP23.89■■□□□ 1.42
SSBP3-202ENST00000357475 DTX1Q86Y01 620 aa23.89■■□□□ 1.42
SSBP3-202ENST00000357475 OR4N5Q8IXE1 308 aa23.89■■□□□ 1.42
SSBP3-202ENST00000357475 ESX1Q8N693 406 aa23.89■■□□□ 1.42
SSBP3-202ENST00000357475 OR7A2PQ8NGA2 310 aa23.89■■□□□ 1.42
SSBP3-202ENST00000357475 NKD1Q969G9 470 aa23.89■■□□□ 1.42
SSBP3-202ENST00000357475 RPF2Q9H7B2 306 aaKnown RBP23.89■■□□□ 1.42
SSBP3-202ENST00000357475 CROTQ9UKG9 612 aa23.89■■□□□ 1.42
SSBP3-202ENST00000357475 ACSL6Q9UKU0 697 aa23.89■■□□□ 1.42
SSBP3-202ENST00000357475 TRIM33Q9UPN9 1127 aa23.89■■□□□ 1.42
SSBP3-202ENST00000357475 VSTM2BA6NLU5 285 aa23.89■■□□□ 1.41
SSBP3-202ENST00000357475 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.89■■□□□ 1.41
SSBP3-202ENST00000357475 FCHO1O14526 889 aa23.89■■□□□ 1.41
SSBP3-202ENST00000357475 LDB3O75112 727 aa23.89■■□□□ 1.41
SSBP3-202ENST00000357475 PIM1P11309 404 aaPredicted RBP23.89■■□□□ 1.41
SSBP3-202ENST00000357475 TCN2P20062 427 aa23.89■■□□□ 1.41
SSBP3-202ENST00000357475 F8A1P23610 371 aa23.89■■□□□ 1.41
SSBP3-202ENST00000357475 BUD31P41223 144 aaPredicted RBP23.89■■□□□ 1.41
SSBP3-202ENST00000357475 ASMTP46597 345 aa23.89■■□□□ 1.41
SSBP3-202ENST00000357475 MAP7Q14244 749 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms