RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 MSL3P1P0C860 447 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 ZNF8P17098 575 aaPredicted RBP9.68□□□□□ -0.86
PTPRA-203ENST00000356147 CD70P32970 193 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 ATN1P54259 1190 aaPredicted RBP9.68□□□□□ -0.86
PTPRA-203ENST00000356147 C2orf80Q0P641 193 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 TATDN3Q17R31 274 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.68□□□□□ -0.864e-8■■□□□ 14.3
PTPRA-203ENST00000356147 BTBD16Q32M84 506 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 FLYWCH1Q4VC44 716 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 TTC23LQ6PF05 361 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 AGTRAPQ6RW13 159 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 LAS2Q8IYD9 372 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 SMAD5Q99717 465 aaKnown RBP9.68□□□□□ -0.86
PTPRA-203ENST00000356147 NRTNQ99748 197 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 TSSK6Q9BXA6 273 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 RACGAP1Q9H0H5 632 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 ZDHHC6Q9H6R6 413 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 TXNL4BQ9NX01 149 aaKnown RBP9.68□□□□□ -0.86
PTPRA-203ENST00000356147 TRPM5Q9NZQ8 1165 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 SSR3Q9UNL2 185 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 GPR52Q9Y2T5 361 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 OR51B4Q9Y5P0 310 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 SCN10AQ9Y5Y9 1956 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 MYO10Q9HD67 2058 aa9.68□□□□□ -0.86
PTPRA-203ENST00000356147 A0A075B6Q4 140 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 LOC102723532A0A0G2JNH3 316 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 SLC35F4A4IF30 521 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 FADS2P1A8MWK0 482 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 MYL12BO14950 172 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 HOXB6P17509 224 aaKnown RBP9.67□□□□□ -0.86
PTPRA-203ENST00000356147 CD79BP40259 229 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 XCR1P46094 333 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 PTPN5P54829 565 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 P2RX3P56373 397 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 TLE2Q04725 743 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 CHRNEQ04844 493 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 TEAD4Q15561 434 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 GGTA1PQ4G0N0 100 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 C19orf48Q6RUI8 117 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 CHST9Q7L1S5 443 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 VN1R5Q7Z5H4 357 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 KRT73Q86Y46 540 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 PHC2Q8IXK0 858 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 ZNF740Q8NDX6 193 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 GATAD2BQ8WXI9 593 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 GDF15Q99988 308 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 UCK2Q9BZX2 261 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 RNF121Q9H920 327 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 NPAP1Q9NZP6 1156 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 TEKT2Q9UIF3 430 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 SLC45A1Q9Y2W3 748 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 HSPB11Q9Y547 144 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 CRYZL1O95825 349 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 BCHEP06276 602 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 CKBP12277 381 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 HMGA1P17096 107 aaKnown RBP9.67□□□□□ -0.86
PTPRA-203ENST00000356147 TAS2R50P59544 299 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 AP1S1P61966 158 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 RPS25P62851 125 aaKnown RBP9.67□□□□□ -0.86
PTPRA-203ENST00000356147 QPRTQ15274 297 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 SPDYE7PQ495Y7 208 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 TYW3Q6IPR3 259 aaKnown RBP9.67□□□□□ -0.86
PTPRA-203ENST00000356147 RNF165Q6ZSG1 346 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 PDZD3Q86UT5 571 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 CHCHD4Q8N4Q1 142 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 SIMC1Q8NDZ2 872 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 FAM46DQ8NEK8 389 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 C9orf43Q8TAL5 461 aaPredicted RBP9.67□□□□□ -0.86
PTPRA-203ENST00000356147 SUN5Q8TC36 379 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 KLHL6Q8WZ60 621 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 NEIL2Q969S2 332 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 ALG14Q96F25 216 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 C3orf14Q9HBI5 128 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 SPATA6Q9NWH7 488 aaPredicted RBP9.67□□□□□ -0.86
PTPRA-203ENST00000356147 MAT2BQ9NZL9 334 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 TRAPPC4Q9Y296 219 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 MYOFQ9NZM1 2061 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 HEPACAM2A8MVW5 462 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 ZNF670-ZNF695F2Z2N8 137 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 NTN1O95631 604 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 IFNW1P05000 195 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 KLK1P06870 262 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 PRPH2P23942 346 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 PDHA2P29803 388 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 CCND3P30281 292 aaPredicted RBP9.67□□□□□ -0.86
PTPRA-203ENST00000356147 UQCRC1P31930 480 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 CSTF2P33240 577 aaKnown RBP eCLIP9.67□□□□□ -0.86
PTPRA-203ENST00000356147 ETV5P41161 510 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 IL12RB1P42701 662 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 ETV1P50549 477 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 TARDBPQ13148 414 aaKnown RBP eCLIP9.67□□□□□ -0.861e-12■■■■■ 41.8
PTPRA-203ENST00000356147 GPR33Q49SQ1 333 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 CRTC2Q53ET0 693 aaPredicted RBP9.67□□□□□ -0.86
PTPRA-203ENST00000356147 SDE2Q6IQ49 451 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 PLET1Q6UQ28 207 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 CEACAM20Q6UY09 585 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 CCDC149Q6ZUS6 474 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 TIGD4Q8IY51 512 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 VWA5B2Q8N398 1253 aa9.67□□□□□ -0.86
PTPRA-203ENST00000356147 OR52P1PQ8NH57 321 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms