RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 PCDH7O60245 1069 aa16.83■□□□□ 0.28
PDLIM7-202ENST00000355841 PEX11AO75192 247 aa16.83■□□□□ 0.28
PDLIM7-202ENST00000355841 CPN2P22792 545 aa16.83■□□□□ 0.28
PDLIM7-202ENST00000355841 MAPK12P53778 367 aa16.83■□□□□ 0.28
PDLIM7-202ENST00000355841 TMPRSS3P57727 454 aa16.83■□□□□ 0.28
PDLIM7-202ENST00000355841 CXADRP78310 365 aa16.83■□□□□ 0.28
PDLIM7-202ENST00000355841 GUCY1A3Q02108 690 aa16.83■□□□□ 0.28
PDLIM7-202ENST00000355841 SSPNQ14714 243 aa16.83■□□□□ 0.28
PDLIM7-202ENST00000355841 SPIN4Q56A73 249 aa16.83■□□□□ 0.28
PDLIM7-202ENST00000355841 XKR7Q5GH72 579 aa16.83■□□□□ 0.28
PDLIM7-202ENST00000355841 CLNKQ7Z7G1 428 aa16.83■□□□□ 0.28
PDLIM7-202ENST00000355841 MMP21Q8N119 569 aa16.83■□□□□ 0.28
PDLIM7-202ENST00000355841 ARFGAP2Q8N6H7 521 aa16.83■□□□□ 0.28
PDLIM7-202ENST00000355841 TSLPQ969D9 159 aa16.83■□□□□ 0.28
PDLIM7-202ENST00000355841 MAGEB18Q96M61 343 aa16.83■□□□□ 0.28
PDLIM7-202ENST00000355841 LRTM1Q9HBL6 345 aa16.83■□□□□ 0.28
PDLIM7-202ENST00000355841 ADAM29Q9UKF5 820 aa16.83■□□□□ 0.28
PDLIM7-202ENST00000355841 GNG14A0A1W2PPG7 69 aa16.82■□□□□ 0.28
PDLIM7-202ENST00000355841 K7ENP7 123 aa16.82■□□□□ 0.28
PDLIM7-202ENST00000355841 MASP2O00187 686 aa16.82■□□□□ 0.28
PDLIM7-202ENST00000355841 PROM1O43490 865 aa16.82■□□□□ 0.28
PDLIM7-202ENST00000355841 RHAGQ02094 409 aa16.82■□□□□ 0.28
PDLIM7-202ENST00000355841 UGT8Q16880 541 aa16.82■□□□□ 0.28
PDLIM7-202ENST00000355841 RFTN2Q52LD8 501 aaPredicted RBP16.82■□□□□ 0.28
PDLIM7-202ENST00000355841 VWA5B1Q5TIE3 1220 aa16.82■□□□□ 0.28
PDLIM7-202ENST00000355841 INO80CQ6PI98 192 aaPredicted RBP16.82■□□□□ 0.28
PDLIM7-202ENST00000355841 RNF165Q6ZSG1 346 aa16.82■□□□□ 0.28
PDLIM7-202ENST00000355841 LANCL3Q6ZV70 420 aa16.82■□□□□ 0.28
PDLIM7-202ENST00000355841 PPP1R32Q7Z5V6 425 aa16.82■□□□□ 0.28
PDLIM7-202ENST00000355841 AMER2Q8N7J2 671 aa16.82■□□□□ 0.28
PDLIM7-202ENST00000355841 ZSCAN1Q8NBB4 408 aa16.82■□□□□ 0.28
PDLIM7-202ENST00000355841 ADAMTS17Q8TE56 1095 aa16.82■□□□□ 0.28
PDLIM7-202ENST00000355841 C11orf24Q96F05 449 aaPredicted RBP16.82■□□□□ 0.28
PDLIM7-202ENST00000355841 C1orf109Q9NX04 203 aa16.82■□□□□ 0.28
PDLIM7-202ENST00000355841 USP24Q9UPU5 2620 aa16.82■□□□□ 0.28
PDLIM7-202ENST00000355841 HS3ST3B1Q9Y662 390 aa16.82■□□□□ 0.28
PDLIM7-202ENST00000355841 PRMT3O60678 531 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 AIFM1O95831 613 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 IL10P22301 178 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 JAK1P23458 1154 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 MMP11P24347 488 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 TIA1P31483 386 aaKnown RBP eCLIP16.81■□□□□ 0.281e-6■□□□□ 11.1
PDLIM7-202ENST00000355841 RPL38P63173 70 aaKnown RBP16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 ID2Q02363 134 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 VAC14Q08AM6 782 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 CDC20Q12834 499 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 KIAA0040Q15053 153 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 TUBB8Q3ZCM7 444 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 CDC26Q8NHZ8 85 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 FAM76AQ8TAV0 307 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 TUBGCP3Q96CW5 907 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 PTCHD1Q96NR3 888 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 FAM117AQ9C073 453 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 NECTIN3Q9NQS3 549 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 LYARQ9NX58 379 aaKnown RBP16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 DLGAP4Q9Y2H0 992 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 IGHV3-20A0A0C4DH32 117 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 TCP11X1B4DZS4 312 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 TGFBR3LH3BV60 316 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 LDB3O75112 727 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 ALOX12BO75342 701 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 ANXA4P09525 319 aaPredicted RBP16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 HK2P52789 917 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 UCNP55089 124 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 TNFRSF17Q02223 184 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 SLC13A2Q13183 592 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 ATP1A4Q13733 1029 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 NSDHLQ15738 373 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 NDUFAF5Q5TEU4 345 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 NOXRED1Q6NXP6 359 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 KIRREL2Q6UWL6 708 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 MRGPREQ86SM8 312 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 CRLF3Q8IUI8 442 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 WDR75Q8IWA0 830 aaKnown RBP16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 OR4N5Q8IXE1 308 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 TM4SF18Q96CE8 201 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 C7orf26Q96N11 449 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 RPF2Q9H7B2 306 aaKnown RBP16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 PRTFDC1Q9NRG1 225 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 SEMA3GQ9NS98 782 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 PHF11Q9UIL8 331 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 MCM8Q9UJA3 840 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 SPACA6W5XKT8 324 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 PCSK5Q92824 1860 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 PTPRQQ9UMZ3 2332 aa16.81■□□□□ 0.28
PDLIM7-202ENST00000355841 SOCS6O14544 535 aa16.8■□□□□ 0.28
PDLIM7-202ENST00000355841 PGRMC2O15173 223 aa16.8■□□□□ 0.28
PDLIM7-202ENST00000355841 C8orf89P0DMQ9 161 aa16.8■□□□□ 0.28
PDLIM7-202ENST00000355841 NR2F6P10588 404 aa16.8■□□□□ 0.28
PDLIM7-202ENST00000355841 PRPH2P23942 346 aa16.8■□□□□ 0.28
PDLIM7-202ENST00000355841 TACR1P25103 407 aa16.8■□□□□ 0.28
PDLIM7-202ENST00000355841 TAS2R50P59544 299 aa16.8■□□□□ 0.28
PDLIM7-202ENST00000355841 MC1RQ01726 317 aa16.8■□□□□ 0.28
PDLIM7-202ENST00000355841 EEF1A2Q05639 463 aaKnown RBP16.8■□□□□ 0.28
PDLIM7-202ENST00000355841 TERF2Q15554 542 aa16.8■□□□□ 0.28
PDLIM7-202ENST00000355841 DEFB109BQ30KR1 87 aa16.8■□□□□ 0.28
PDLIM7-202ENST00000355841 ATP6AP1LQ52LC2 224 aa16.8■□□□□ 0.28
PDLIM7-202ENST00000355841 GALNT18Q6P9A2 607 aa16.8■□□□□ 0.28
PDLIM7-202ENST00000355841 MAVSQ7Z434 540 aa16.8■□□□□ 0.28
PDLIM7-202ENST00000355841 PIWIL2Q8TC59 973 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms