RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 SEMA6AQ9H2E6 1030 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 LYRM4Q9HD34 91 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 IL1RAPQ9NPH3 570 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 AP4B1Q9Y6B7 739 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 CACNA1IQ9P0X4 2223 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 NOBOXO60393 691 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 HHEXQ03014 270 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 PLCL1Q15111 1095 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 CARM1Q86X55 608 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 MIPOL1Q8TD10 442 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.32■□□□□ 0.2
VPS13B-201ENST00000355155 SLC35C2Q9NQQ7 365 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 KCMF1Q9P0J7 381 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 CSNK1G3Q9Y6M4 447 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 A0A1W2PR48 441 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 POLR2CP19387 275 aaPredicted RBP16.32■□□□□ 0.2
VPS13B-201ENST00000355155 EPHA4P54764 986 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 APLFQ8IW19 511 aaPredicted RBP16.32■□□□□ 0.2
VPS13B-201ENST00000355155 CARFQ8N187 725 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 ZFP28Q8NHY6 868 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 PATE1Q8WXA2 126 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 KLHL6Q8WZ60 621 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 C10orf90Q96M02 699 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 ZNF285Q96NJ3 590 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 ANKRD60Q9BZ19 345 aa16.32■□□□□ 0.2
VPS13B-201ENST00000355155 PRMT8Q9NR22 394 aaPredicted RBP16.32■□□□□ 0.2
VPS13B-201ENST00000355155 LMO7DNF2Z398 122 aa16.31■□□□□ 0.2
VPS13B-201ENST00000355155 SLC35G6P0C7Q6 338 aa16.31■□□□□ 0.2
VPS13B-201ENST00000355155 RXRGP48443 463 aa16.31■□□□□ 0.2
VPS13B-201ENST00000355155 TFAP2CQ92754 450 aa16.31■□□□□ 0.2
VPS13B-201ENST00000355155 ZNF681Q96N22 645 aa16.31■□□□□ 0.2
VPS13B-201ENST00000355155 AMDHD1Q96NU7 426 aa16.31■□□□□ 0.2
VPS13B-201ENST00000355155 CIB1Q99828 191 aa16.31■□□□□ 0.2
VPS13B-201ENST00000355155 NPLQ9BXD5 320 aaPredicted RBP16.31■□□□□ 0.2
VPS13B-201ENST00000355155 NLNQ9BYT8 704 aa16.31■□□□□ 0.2
VPS13B-201ENST00000355155 PHF11Q9UIL8 331 aa16.31■□□□□ 0.2
VPS13B-201ENST00000355155 SIT1Q9Y3P8 196 aa16.31■□□□□ 0.2
VPS13B-201ENST00000355155 MAGP20916 626 aa16.31■□□□□ 0.2
VPS13B-201ENST00000355155 RPL6Q02878 288 aaKnown RBP16.31■□□□□ 0.2
VPS13B-201ENST00000355155 GK3PQ14409 553 aa16.31■□□□□ 0.2
VPS13B-201ENST00000355155 NR1D2Q14995 579 aa16.31■□□□□ 0.2
VPS13B-201ENST00000355155 SUZ12Q15022 739 aaKnown RBP16.31■□□□□ 0.2
VPS13B-201ENST00000355155 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.31■□□□□ 0.2
VPS13B-201ENST00000355155 TMEM214Q6NUQ4 689 aaKnown RBP16.31■□□□□ 0.2
VPS13B-201ENST00000355155 NRBF2Q96F24 287 aa16.31■□□□□ 0.2
VPS13B-201ENST00000355155 SLC22A7Q9Y694 548 aa16.31■□□□□ 0.2
VPS13B-201ENST00000355155 PPM1DO15297 605 aa16.3■□□□□ 0.2
VPS13B-201ENST00000355155 PLA2G16P53816 162 aa16.3■□□□□ 0.2
VPS13B-201ENST00000355155 HNRNPKP61978 463 aaKnown RBP eCLIP16.3■□□□□ 0.2
VPS13B-201ENST00000355155 COX20Q5RI15 118 aa16.3■□□□□ 0.2
VPS13B-201ENST00000355155 WDR5BQ86VZ2 330 aa16.3■□□□□ 0.2
VPS13B-201ENST00000355155 SEPHS2Q99611 448 aa16.3■□□□□ 0.2
VPS13B-201ENST00000355155 GLIPR2Q9H4G4 154 aa16.3■□□□□ 0.2
VPS13B-201ENST00000355155 EPHA6Q9UF33 1036 aa16.3■□□□□ 0.2
VPS13B-201ENST00000355155 OAZ3Q9UMX2 235 aa16.3■□□□□ 0.2
VPS13B-201ENST00000355155 PADI2Q9Y2J8 665 aa16.3■□□□□ 0.2
VPS13B-201ENST00000355155 AIFM1O95831 613 aa16.3■□□□□ 0.2
VPS13B-201ENST00000355155 CKMT2P17540 419 aa16.3■□□□□ 0.2
VPS13B-201ENST00000355155 PDK3Q15120 406 aa16.3■□□□□ 0.2
VPS13B-201ENST00000355155 KLHL35Q6PF15 583 aa16.3■□□□□ 0.2
VPS13B-201ENST00000355155 ZNF438Q7Z4V0 828 aa16.3■□□□□ 0.2
VPS13B-201ENST00000355155 SAMD14Q8IZD0 417 aaPredicted RBP16.3■□□□□ 0.2
VPS13B-201ENST00000355155 ARL14Q8N4G2 192 aa16.3■□□□□ 0.2
VPS13B-201ENST00000355155 OR8K5Q8NH50 307 aa16.3■□□□□ 0.2
VPS13B-201ENST00000355155 FBXO30Q8TB52 745 aa16.3■□□□□ 0.2
VPS13B-201ENST00000355155 IL21RQ9HBE5 538 aa16.3■□□□□ 0.2
VPS13B-201ENST00000355155 CD320Q9NPF0 282 aa16.3■□□□□ 0.2
VPS13B-201ENST00000355155 HRASLS2Q9NWW9 162 aa16.3■□□□□ 0.2
VPS13B-201ENST00000355155 MS4A12Q9NXJ0 267 aa16.3■□□□□ 0.2
VPS13B-201ENST00000355155 FAF1Q9UNN5 650 aaPredicted RBP16.3■□□□□ 0.2
VPS13B-201ENST00000355155 ATG4BQ9Y4P1 393 aa16.3■□□□□ 0.2
VPS13B-201ENST00000355155 P2RX6O15547 441 aa16.29■□□□□ 0.2
VPS13B-201ENST00000355155 ABHD13Q7L211 337 aa16.29■□□□□ 0.2
VPS13B-201ENST00000355155 CBR4Q8N4T8 237 aa16.29■□□□□ 0.2
VPS13B-201ENST00000355155 ZNF655Q8N720 491 aaPredicted RBP16.29■□□□□ 0.2
VPS13B-201ENST00000355155 SUN3Q8TAQ9 357 aa16.29■□□□□ 0.2
VPS13B-201ENST00000355155 ARHGEF17Q96PE2 2063 aaPredicted RBP16.29■□□□□ 0.2
VPS13B-201ENST00000355155 RNF103-CHMP3A0A140T963 221 aa16.29■□□□□ 0.2
VPS13B-201ENST00000355155 A6NHS1 94 aa16.29■□□□□ 0.2
VPS13B-201ENST00000355155 H0YAE9 185 aa16.29■□□□□ 0.2
VPS13B-201ENST00000355155 B4GALT2O60909 372 aa16.29■□□□□ 0.2
VPS13B-201ENST00000355155 LYNP07948 512 aa16.29■□□□□ 0.2
VPS13B-201ENST00000355155 NUDT7P0C024 238 aa16.29■□□□□ 0.2
VPS13B-201ENST00000355155 ZNF10P21506 573 aaPredicted RBP16.29■□□□□ 0.2
VPS13B-201ENST00000355155 MANFP55145 182 aaKnown RBP16.29■□□□□ 0.2
VPS13B-201ENST00000355155 TNFRSF17Q02223 184 aa16.29■□□□□ 0.2
VPS13B-201ENST00000355155 C16orf72Q14CZ0 275 aa16.29■□□□□ 0.2
VPS13B-201ENST00000355155 SLC36A3Q495N2 470 aa16.29■□□□□ 0.2
VPS13B-201ENST00000355155 WDR45BQ5MNZ6 344 aa16.29■□□□□ 0.2
VPS13B-201ENST00000355155 PRAMEF8Q5VWM4 474 aa16.29■□□□□ 0.2
VPS13B-201ENST00000355155 PRAMEF7Q5VXH5 474 aa16.29■□□□□ 0.2
VPS13B-201ENST00000355155 TRIM73Q86UV7 250 aa16.29■□□□□ 0.2
VPS13B-201ENST00000355155 C11orf74Q86VG3 221 aa16.29■□□□□ 0.2
VPS13B-201ENST00000355155 FAM46DQ8NEK8 389 aa16.29■□□□□ 0.2
VPS13B-201ENST00000355155 OR5K1Q8NHB7 308 aa16.29■□□□□ 0.2
VPS13B-201ENST00000355155 NCLNQ969V3 563 aa16.29■□□□□ 0.2
VPS13B-201ENST00000355155 C7orf34Q96L11 122 aa16.29■□□□□ 0.2
VPS13B-201ENST00000355155 PADI4Q9UM07 663 aa16.29■□□□□ 0.2
VPS13B-201ENST00000355155 TRBV23OR9-2A0A075B6M9 112 aa16.28■□□□□ 0.2
VPS13B-201ENST00000355155 ETFAP13804 333 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms