RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 OR9A1PQ8NGU1 263 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 PGM2Q96G03 612 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 LRRC1Q9BTT6 524 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 PFDN4Q9NQP4 134 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 CATSPERZQ9NTU4 200 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 ABHD10Q9NUJ1 306 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 VPS13CQ709C8 3753 aa10.46□□□□□ -0.74
RTN3-204ENST00000354497 MAP1AP78559 2803 aaPredicted RBP10.45□□□□□ -0.74
RTN3-204ENST00000354497 SH3PXD2BA1X283 911 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 ZNF860A6NHJ4 632 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 A6NNC1 897 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 KPNA5O15131 536 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 SLC16A5O15375 505 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 PJA2O43164 708 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 PSMD3O43242 534 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 UBOX5O94941 541 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 GSTT2P0CG29 244 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 GSTT2BP0CG30 244 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 ACVR2AP27037 513 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 PNLIPRP1P54315 467 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 MLF1P58340 268 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 RELAQ04206 551 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 PRDX1Q06830 199 aaKnown RBP10.45□□□□□ -0.74
RTN3-204ENST00000354497 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.45□□□□□ -0.74
RTN3-204ENST00000354497 ZNF425Q6IV72 752 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 C8orf74Q6P047 294 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 B3GNT6Q6ZMB0 384 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 CHSY3Q70JA7 882 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 SPATA24Q86W54 205 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 CYP4Z2PQ8N1L4 340 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 FAM71DQ8N9W8 422 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 SPERTQ8NA61 448 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 ELP5Q8TE02 316 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 MBD6Q96DN6 1003 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 ARSGQ96EG1 525 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 DNAJC7Q99615 494 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 CHP1Q99653 195 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 TMEM109Q9BVC6 243 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 DEFB126Q9BYW3 111 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 DDX47Q9H0S4 455 aaKnown RBP10.45□□□□□ -0.74
RTN3-204ENST00000354497 NHEJ1Q9H9Q4 299 aaPredicted RBP10.45□□□□□ -0.74
RTN3-204ENST00000354497 MARCH4Q9P2E8 410 aaPredicted RBP10.45□□□□□ -0.74
RTN3-204ENST00000354497 ARL2BPQ9Y2Y0 163 aa10.45□□□□□ -0.74
RTN3-204ENST00000354497 A0A0G2JNJ9 132 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 FIGNL2A6NMB9 653 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 ZNF839A8K0R7 811 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 A8MUA0 341 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 MAGEB17A8MXT2 336 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 H7BY64 318 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 ACOT7O00154 380 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 NDUFS3O75489 264 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 ATE1O95260 518 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 LY6G6DO95868 133 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 LYNP07948 512 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 GLI4P10075 376 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 NAT2P11245 290 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 PSMA3P25788 255 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 TTPAP49638 278 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 PPIAP62937 165 aaKnown RBP10.44□□□□□ -0.74
RTN3-204ENST00000354497 RHAGQ02094 409 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 CDH17Q12864 832 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 TYSND1Q2T9J0 566 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 ZNF362Q5T0B9 420 aaPredicted RBP10.44□□□□□ -0.74
RTN3-204ENST00000354497 NXNQ6DKJ4 435 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 LINC00523Q86TU6 105 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 LIX1LQ8IVB5 337 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 KLHDC8BQ8IXV7 354 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 TMEM156Q8N614 296 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 C16orf52Q8NHV5 167 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 SLCO2A1Q92959 643 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 ZNF778Q96MU6 729 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 PRAP1Q96NZ9 151 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 PKP4Q99569 1192 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 EBNA1BP2Q99848 306 aaKnown RBP10.44□□□□□ -0.74
RTN3-204ENST00000354497 TTYH2Q9BSA4 534 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 OSBPL8Q9BZF1 889 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 TPK1Q9H3S4 243 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 ATAD3AQ9NVI7 634 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 FKBP14Q9NWM8 211 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 ALKBH4Q9NXW9 302 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 CRNNQ9UBG3 495 aaPredicted RBP10.44□□□□□ -0.74
RTN3-204ENST00000354497 Q9UFV3 132 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 ZNF180Q9UJW8 692 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 NAALAD2Q9Y3Q0 740 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 FLNAP21333 2647 aaKnown RBP10.44□□□□□ -0.74
RTN3-204ENST00000354497 INTS1Q8N201 2190 aaKnown RBP10.44□□□□□ -0.74
RTN3-204ENST00000354497 GTF3C1Q12789 2109 aa10.44□□□□□ -0.74
RTN3-204ENST00000354497 FAM171A2A8MVW0 826 aa10.43□□□□□ -0.74
RTN3-204ENST00000354497 B4GALT2O60909 372 aa10.43□□□□□ -0.74
RTN3-204ENST00000354497 KRT4P19013 534 aa10.43□□□□□ -0.74
RTN3-204ENST00000354497 TRHRP34981 398 aaPredicted RBP10.43□□□□□ -0.74
RTN3-204ENST00000354497 CYLC1P35663 651 aaPredicted RBP10.43□□□□□ -0.74
RTN3-204ENST00000354497 ABATP80404 500 aa10.43□□□□□ -0.74
RTN3-204ENST00000354497 GUCY2DQ02846 1103 aa10.43□□□□□ -0.74
RTN3-204ENST00000354497 HYAL2Q12891 473 aa10.43□□□□□ -0.74
RTN3-204ENST00000354497 SLC25A35Q3KQZ1 300 aa10.43□□□□□ -0.74
RTN3-204ENST00000354497 MDGA2Q7Z553 956 aa10.43□□□□□ -0.74
RTN3-204ENST00000354497 PDSS2Q86YH6 399 aa10.43□□□□□ -0.74
RTN3-204ENST00000354497 GSPT2Q8IYD1 628 aaKnown RBP10.43□□□□□ -0.74
RTN3-204ENST00000354497 VWA5B2Q8N398 1253 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms