RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 SCHIP1Q9P0W5 487 aaPredicted RBP13.25□□□□□ -0.29
TRIM4-201ENST00000349062 RPS6KA6Q9UK32 745 aa13.25□□□□□ -0.29
TRIM4-201ENST00000349062 COL6A3P12111 3177 aa13.25□□□□□ -0.29
TRIM4-201ENST00000349062 GSAPA4D1B5 854 aa13.25□□□□□ -0.29
TRIM4-201ENST00000349062 CLDN25C9JDP6 229 aa13.25□□□□□ -0.29
TRIM4-201ENST00000349062 KMOO15229 486 aa13.25□□□□□ -0.29
TRIM4-201ENST00000349062 INMTO95050 263 aa13.25□□□□□ -0.29
TRIM4-201ENST00000349062 CCR8P51685 355 aa13.25□□□□□ -0.29
TRIM4-201ENST00000349062 C1orf61Q13536 156 aa13.25□□□□□ -0.29
TRIM4-201ENST00000349062 MLF2Q15773 248 aaPredicted RBP13.25□□□□□ -0.29
TRIM4-201ENST00000349062 GCNT6Q5T4J0 391 aa13.25□□□□□ -0.29
TRIM4-201ENST00000349062 DEF8Q6ZN54 512 aa13.25□□□□□ -0.29
TRIM4-201ENST00000349062 VN1R5Q7Z5H4 357 aa13.25□□□□□ -0.29
TRIM4-201ENST00000349062 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.25□□□□□ -0.29
TRIM4-201ENST00000349062 TTC29Q8NA56 475 aaPredicted RBP13.25□□□□□ -0.29
TRIM4-201ENST00000349062 PAPD5Q8NDF8 572 aaKnown RBP13.25□□□□□ -0.29
TRIM4-201ENST00000349062 OR9Q2Q8NGE9 314 aa13.25□□□□□ -0.29
TRIM4-201ENST00000349062 CHPT1Q8WUD6 406 aa13.25□□□□□ -0.29
TRIM4-201ENST00000349062 SLC35B4Q969S0 331 aa13.25□□□□□ -0.29
TRIM4-201ENST00000349062 NLNQ9BYT8 704 aa13.25□□□□□ -0.29
TRIM4-201ENST00000349062 SIRT5Q9NXA8 310 aa13.25□□□□□ -0.29
TRIM4-201ENST00000349062 GIN1Q9NXP7 522 aa13.25□□□□□ -0.29
TRIM4-201ENST00000349062 MAN2B2Q9Y2E5 1009 aa13.25□□□□□ -0.29
TRIM4-201ENST00000349062 TMA7Q9Y2S6 64 aaKnown RBP13.25□□□□□ -0.29
TRIM4-201ENST00000349062 FAM32AQ9Y421 112 aaKnown RBP13.25□□□□□ -0.29
TRIM4-201ENST00000349062 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.24□□□□□ -0.29
TRIM4-201ENST00000349062 FADS2O95864 444 aaKnown RBP13.24□□□□□ -0.29
TRIM4-201ENST00000349062 FURINP09958 794 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 PTX3P26022 381 aaPredicted RBP13.24□□□□□ -0.29
TRIM4-201ENST00000349062 DAPP51397 102 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 OLR1P78380 273 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 SLC13A2Q13183 592 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 INAQ16352 499 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 DPY19L1Q2PZI1 675 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 TTC23Q5W5X9 447 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 CPZQ66K79 652 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 OR4N5Q8IXE1 308 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 CACTIN-AS1Q8N1I8 211 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 PIK3C3Q8NEB9 887 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 OR8J2Q8NGG1 315 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 ZFP90Q8TF47 636 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 RLN3Q8WXF3 142 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 PHOX2BQ99453 314 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 SGPP1Q9BX95 441 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 CXorf36Q9H7Y0 433 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 RLIMQ9NVW2 624 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 HELZP42694 1942 aaKnown RBP13.24□□□□□ -0.29
TRIM4-201ENST00000349062 CACNB4O00305 520 aaPredicted RBP13.24□□□□□ -0.29
TRIM4-201ENST00000349062 TMPRSS11DO60235 418 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 UGDHO60701 494 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 BCAS1O75363 584 aaPredicted RBP13.24□□□□□ -0.29
TRIM4-201ENST00000349062 PSMB9P28065 219 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 GZMMP51124 257 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 ADARB1P78563 741 aaKnown RBP13.24□□□□□ -0.29
TRIM4-201ENST00000349062 CDK6Q00534 326 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 TMEM52BQ4KMG9 183 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 ZNF362Q5T0B9 420 aaPredicted RBP13.24□□□□□ -0.29
TRIM4-201ENST00000349062 CALHM3Q86XJ0 350 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 CCDC116Q8IYX3 515 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 OR52E1Q8NGJ3 308 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 OR5K2Q8NHB8 316 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 CCDC115Q96NT0 180 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 CAMK1GQ96NX5 476 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 BBS4Q96RK4 519 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 SLAMF7Q9NQ25 335 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 TMEM184CQ9NVA4 438 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 GPATCH2Q9NW75 528 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 ASIC5Q9NY37 505 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 TAAR2Q9P1P5 351 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 K7EQS6 105 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 TNFRSF11BO00300 401 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 BTN3A3O00478 584 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 ANGPTL1O95841 491 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 CAPNS1P04632 268 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 RETP07949 1114 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 HLCSP50747 726 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 VBP1P61758 197 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 METRNLQ641Q3 311 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 AHSA2Q719I0 299 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 SLC9B2Q86UD5 537 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 CADM3Q8N126 398 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 TRUB1Q8WWH5 349 aaKnown RBP13.24□□□□□ -0.29
TRIM4-201ENST00000349062 SMPDL3AQ92484 453 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 PRR14Q9BWN1 585 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 QRSL1Q9H0R6 528 aaKnown RBP13.24□□□□□ -0.29
TRIM4-201ENST00000349062 DPEP2Q9H4A9 486 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 SIAEQ9HAT2 523 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 MRPS30Q9NP92 439 aaKnown RBP13.24□□□□□ -0.29
TRIM4-201ENST00000349062 TAS2R9Q9NYW1 312 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 GPR34Q9UPC5 381 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 PIAS3Q9Y6X2 628 aa13.24□□□□□ -0.29
TRIM4-201ENST00000349062 NTSR1P30989 418 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 IGFALSP35858 605 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 MRPL19P49406 292 aaKnown RBP13.23□□□□□ -0.29
TRIM4-201ENST00000349062 DPTQ07507 201 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 KHDRBS2Q5VWX1 349 aaKnown RBP13.23□□□□□ -0.29
TRIM4-201ENST00000349062 ZNF773Q6PK81 442 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 SHISA5Q8N114 240 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 FBXL6Q8N531 539 aa13.23□□□□□ -0.29
TRIM4-201ENST00000349062 ZNF540Q8NDQ6 660 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms