RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 NSDHLQ15738 373 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 KANK2Q63ZY3 851 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 CLEC6AQ6EIG7 209 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 RNF165Q6ZSG1 346 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 SHISA6Q6ZSJ9 500 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 COMMD6Q7Z4G1 85 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 ZC3H7AQ8IWR0 971 aaKnown RBP11.16□□□□□ -0.62
SNCA-202ENST00000345009 CA13Q8N1Q1 262 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 RNF175Q8N4F7 328 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 PLPP5Q8NEB5 264 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 FAM76AQ8TAV0 307 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 LRRC8CQ8TDW0 803 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 PTCHD1Q96NR3 888 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 HBEGFQ99075 208 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 MRPL1Q9BYD6 325 aaKnown RBP11.16□□□□□ -0.62
SNCA-202ENST00000345009 RIC8BQ9NVN3 520 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 PSME2Q9UL46 239 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 MAN2B2Q9Y2E5 1009 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 WBP11Q9Y2W2 641 aaKnown RBP11.16□□□□□ -0.62
SNCA-202ENST00000345009 MMACHCQ9Y4U1 282 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 DNAJC15Q9Y5T4 150 aa11.16□□□□□ -0.62
SNCA-202ENST00000345009 MGAQ8IWI9 3026 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 GNG14A0A1W2PPG7 69 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 SLCO1B7G3V0H7 640 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 J3QL48 77 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 KLHL41O60662 606 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 CNOT3O75175 753 aaKnown RBP11.15□□□□□ -0.62
SNCA-202ENST00000345009 ALOX12BO75342 701 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 SEC22BO75396 215 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 RSL1D1O76021 490 aaKnown RBP11.15□□□□□ -0.62
SNCA-202ENST00000345009 ETHE1O95571 254 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 B3GALT4O96024 378 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 ITGB2P05107 769 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 UMODP07911 640 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 ICAM2P13598 275 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 ACPPP15309 386 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 CHN1P15882 459 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 TRA2BP62995 288 aaKnown RBP11.15□□□□□ -0.62
SNCA-202ENST00000345009 HMGCS1Q01581 520 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 BTKQ06187 659 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 ACTN3Q08043 901 aaPredicted RBP11.15□□□□□ -0.62
SNCA-202ENST00000345009 SLC13A2Q13183 592 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 IL10RAQ13651 578 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 TCHHL1Q5QJ38 904 aaPredicted RBP11.15□□□□□ -0.62
SNCA-202ENST00000345009 SCIMPQ6UWF3 145 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 ZNF793Q6ZN11 406 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 QSOX2Q6ZRP7 698 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 C1orf52Q8N6N3 182 aaKnown RBP11.15□□□□□ -0.62
SNCA-202ENST00000345009 TMEM102Q8N9M5 508 aaPredicted RBP11.15□□□□□ -0.62
SNCA-202ENST00000345009 AGR3Q8TD06 166 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 CHTF18Q8WVB6 975 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 TWIST2Q8WVJ9 160 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 APOBEC4Q8WW27 367 aaKnown RBP11.15□□□□□ -0.62
SNCA-202ENST00000345009 ZNF75CPQ92670 426 aaPredicted RBP11.15□□□□□ -0.62
SNCA-202ENST00000345009 TANKQ92844 425 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 PPP3R2Q96LZ3 170 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 FAIM2Q9BWQ8 316 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 ACPTQ9BZG2 426 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 VN1R1Q9GZP7 353 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 C1orf109Q9NX04 203 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 KCMF1Q9P0J7 381 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 ZDHHC2Q9UIJ5 367 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 MCM8Q9UJA3 840 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 FBXW2Q9UKT8 454 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 G3BP2Q9UN86 482 aaKnown RBP11.15□□□□□ -0.62
SNCA-202ENST00000345009 TMED5Q9Y3A6 229 aa11.15□□□□□ -0.62
SNCA-202ENST00000345009 LAMA5O15230 3695 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 A0A0A6YYD5 115 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 TRPC5OSA6NMA1 111 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 C4orf51C9J302 202 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 CYR61O00622 381 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 LCE2BO14633 110 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 PROM1O43490 865 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 ITM2AO43736 263 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 CTNSO60931 367 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 VPS4BO75351 444 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 EEDO75530 441 aaKnown RBP11.14□□□□□ -0.63
SNCA-202ENST00000345009 CDC123O75794 336 aaPredicted RBP11.14□□□□□ -0.63
SNCA-202ENST00000345009 LINC00032P0C843 101 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 WT1P19544 449 aaPredicted RBP11.14□□□□□ -0.63
SNCA-202ENST00000345009 MAPK1P28482 360 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 HTR6P50406 440 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 HK2P52789 917 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 SNRPNP63162 240 aaKnown RBP11.14□□□□□ -0.63
SNCA-202ENST00000345009 RHDQ02161 417 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 TBL3Q12788 808 aaKnown RBP11.14□□□□□ -0.63
SNCA-202ENST00000345009 STX4Q12846 297 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 SERTAD2Q14140 314 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 NR6A1Q15406 480 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 DEFB109BQ30KR1 87 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 IRAK1BP1Q5VVH5 260 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 GALNT18Q6P9A2 607 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 BORAQ6PGQ7 559 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 C19orf48Q6RUI8 117 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 NDUFAF7Q7L592 441 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 MRGPREQ86SM8 312 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 CRLF3Q8IUI8 442 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 CLEC1AQ8NC01 280 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 MAPKAP1Q9BPZ7 522 aa11.14□□□□□ -0.63
SNCA-202ENST00000345009 ARHGAP9Q9BRR9 750 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms