RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 LAP3P28838 519 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 CASP3P42574 277 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 SLC11A2P49281 568 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 TAS2R60P59551 318 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 GPX6P59796 221 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 HNRNPKP61978 463 aaKnown RBP eCLIP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 HTRA3P83110 453 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 MSS51Q4VC12 460 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 GRINAQ7Z429 371 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 C4orf19Q8IY42 314 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 C4orf33Q8N1A6 199 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 SORCS2Q96PQ0 1159 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 PTGFRNQ9P2B2 879 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 MMP24Q9Y5R2 645 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 GXYLT2A0PJZ3 443 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ANKUB1A6NFN9 424 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 SCGB2A1O75556 95 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 SGPL1O95470 568 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 HBE1P02100 147 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 LTKP29376 864 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 DMWDQ09019 674 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ZDHHC1Q8WTX9 485 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 MBD3L1Q8WWY6 194 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 PAFAH2Q99487 392 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 SULT4A1Q9BR01 284 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 PLCH2O75038 1416 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 PRORSD1PA6NEY8 169 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ANXA2P2A6NMY6 339 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 HNRNPDLO14979 420 aaKnown RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 UGDHO60701 494 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ANXA2P07355 339 aaKnown RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 SNRPA1P09661 255 aaKnown RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF35P13682 527 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 GABRB2P47870 512 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 TMEM183BQ1AE95 376 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 NHSL2Q5HYW2 709 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 PCYT2Q99447 389 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 FEM1AQ9BSK4 669 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ACSL6Q9UKU0 697 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 CCDC61Q9Y6R9 512 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 LRRN3E7EW58 273 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 RTCAO00442 366 aaKnown RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 DPYSL4O14531 572 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 SF3B4Q15427 424 aaKnown RBP eCLIP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 RNF139Q8WU17 664 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 KLRG1Q96E93 195 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 OR51B6Q9H340 312 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 LRRN3Q9H3W5 708 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ZBTB26Q9HCK0 441 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 KCNIP2Q9NS61 270 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 FBXO7Q9Y3I1 522 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 HACD1B0YJ81 288 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 XPNPEP2O43895 674 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 IL1AP01583 271 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 HCKP08631 526 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 LINC00032P0C843 101 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF286BP0CG31 522 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 GSTM3P21266 225 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 MAN2A2P49641 1150 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 GMCL1P1Q8NEA9 526 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 OR1J1Q8NGS3 322 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 PPIL3Q9H2H8 161 aaKnown RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 RIIAD1A6NNX1 92 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 BLOC1S5-TXNDC5H3BN57 136 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 CDC42EP1Q00587 391 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 TLE2Q04725 743 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 GDPD4Q6W3E5 623 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 OSTM1Q86WC4 334 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ZFAND4Q86XD8 727 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 SELENOMQ8WWX9 145 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 SPIN2AQ99865 258 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 SPIN2BQ9BPZ2 258 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 KCTD10Q9H3F6 313 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 SLC28A3Q9HAS3 691 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 SIX2Q9NPC8 291 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ISYNA1Q9NPH2 558 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ZNRF3Q9ULT6 936 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 RAP2AP10114 183 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 RIDAP52758 137 aaKnown RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 MLLT10P55197 1068 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 MLLT1Q03111 559 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 BTN1A1Q13410 526 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 THEM5Q8N1Q8 247 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 SCGB1C1Q8TD33 95 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 CNOT9Q92600 299 aaKnown RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 BORCS7Q96B45 105 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 MARVELD1Q9BSK0 173 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 TBX20Q9UMR3 447 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 PPP5D1E7EU14 171 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 TRIM77I1YAP6 450 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 SNRNP70P08621 437 aaKnown RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 DDCP20711 480 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 GIPRP48546 466 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ELOA3BQ3SY89 546 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 NHLRC2Q8NBF2 726 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 SUMF2Q8NBJ7 301 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 ELOA3Q8NG57 546 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 RAB8BQ92930 207 aa3.63□□□□□ -1.83
SYNE2-202ENST00000344113 MEPEQ9NQ76 525 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-202ENST00000344113 TMED3Q9Y3Q3 217 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms