RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 ANKRD60Q9BZ19 345 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 DDX31Q9H8H2 851 aaKnown RBP13.95□□□□□ -0.18
CXCL12-201ENST00000343575 PRM3Q9NNZ6 103 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 TBC1D23Q9NUY8 699 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 SEMA5BQ9P283 1151 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 RAB23Q9ULC3 237 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 MRPS2Q9Y399 296 aaKnown RBP13.95□□□□□ -0.18
CXCL12-201ENST00000343575 MN1Q10571 1320 aaPredicted RBP13.95□□□□□ -0.18
CXCL12-201ENST00000343575 OTOGLQ3ZCN5 2332 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 SCN3AQ9NY46 2000 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 hCG_2014768A0A024R1R8 64 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 ERI3O43414 337 aaKnown RBP13.95□□□□□ -0.18
CXCL12-201ENST00000343575 AKAP10O43572 662 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 ATP6V1G1O75348 118 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 STAMBPO95630 424 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 ZNF883P0CG24 379 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 SLC7A1P30825 629 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 MS4A2Q01362 244 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 SQSTM1Q13501 440 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 PRSS53Q2L4Q9 553 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 FAM174BQ3ZCQ3 159 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 TIGD2Q4W5G0 525 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 TMEM35AQ53FP2 167 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 TOR1AIP1Q5JTV8 583 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 OR4C11Q6IEV9 310 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 ZNF574Q6ZN55 896 aaPredicted RBP13.95□□□□□ -0.18
CXCL12-201ENST00000343575 GPR141Q7Z602 305 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 MMP21Q8N119 569 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 ZNF420Q8TAQ5 688 aaPredicted RBP13.95□□□□□ -0.18
CXCL12-201ENST00000343575 C16orf78Q8WTQ4 265 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 TESCQ96BS2 214 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 PALMDQ9NP74 551 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 SLAMF8Q9P0V8 285 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 KLHL3Q9UH77 587 aa13.95□□□□□ -0.18
CXCL12-201ENST00000343575 A0A0A6YYD5 115 aa13.94□□□□□ -0.18
CXCL12-201ENST00000343575 GNG14A0A1W2PPG7 69 aa13.94□□□□□ -0.18
CXCL12-201ENST00000343575 FXYD1O00168 92 aa13.94□□□□□ -0.18
CXCL12-201ENST00000343575 MYO1DO94832 1006 aa13.94□□□□□ -0.18
CXCL12-201ENST00000343575 RETP07949 1114 aa13.94□□□□□ -0.18
CXCL12-201ENST00000343575 ZNF806P0C7X5 589 aa13.94□□□□□ -0.18
CXCL12-201ENST00000343575 CKMT1AP12532 417 aa13.94□□□□□ -0.18
CXCL12-201ENST00000343575 PSMD7P51665 324 aa13.94□□□□□ -0.18
CXCL12-201ENST00000343575 KCNK10P57789 538 aa13.94□□□□□ -0.18
CXCL12-201ENST00000343575 MC1RQ01726 317 aa13.94□□□□□ -0.18
CXCL12-201ENST00000343575 ZNF763Q0D2J5 394 aa13.94□□□□□ -0.18
CXCL12-201ENST00000343575 CBX3Q13185 183 aa13.94□□□□□ -0.18
CXCL12-201ENST00000343575 FAM71E1Q6IPT2 247 aa13.94□□□□□ -0.18
CXCL12-201ENST00000343575 C8orf82Q6P1X6 216 aaPredicted RBP13.94□□□□□ -0.18
CXCL12-201ENST00000343575 WDR74Q6RFH5 385 aaPredicted RBP13.94□□□□□ -0.18
CXCL12-201ENST00000343575 SHISA5Q8N114 240 aa13.94□□□□□ -0.18
CXCL12-201ENST00000343575 GLB1L3Q8NCI6 653 aaPredicted RBP13.94□□□□□ -0.18
CXCL12-201ENST00000343575 OR7A2PQ8NGA2 310 aa13.94□□□□□ -0.18
CXCL12-201ENST00000343575 OR6C4Q8NGE1 309 aa13.94□□□□□ -0.18
CXCL12-201ENST00000343575 UTP15Q8TED0 518 aaKnown RBP13.94□□□□□ -0.18
CXCL12-201ENST00000343575 BORCS5Q969J3 196 aa13.94□□□□□ -0.18
CXCL12-201ENST00000343575 TM4SF18Q96CE8 201 aa13.94□□□□□ -0.18
CXCL12-201ENST00000343575 ZDHHC12Q96GR4 267 aa13.94□□□□□ -0.18
CXCL12-201ENST00000343575 AHCYL2Q96HN2 611 aaKnown RBP13.94□□□□□ -0.18
CXCL12-201ENST00000343575 AHSPQ9NZD4 102 aa13.94□□□□□ -0.18
CXCL12-201ENST00000343575 ERVK-11Q9UQG0 969 aa13.94□□□□□ -0.18
CXCL12-201ENST00000343575 NDUFAF1Q9Y375 327 aa13.94□□□□□ -0.18
CXCL12-201ENST00000343575 CROCCQ5TZA2 2017 aa13.94□□□□□ -0.18
CXCL12-201ENST00000343575 GABRR3A8MPY1 467 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 MRASO14807 208 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 CFLARO15519 480 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 DUX1O43812 170 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 SCN2BO60939 215 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 PGRP06401 933 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 PORP16435 677 aaPredicted RBP13.93□□□□□ -0.18
CXCL12-201ENST00000343575 PRPS1L1P21108 318 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 WNT3P56703 355 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 TAS2R50P59544 299 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 RAB8AP61006 207 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 MRM1Q6IN84 353 aaKnown RBP13.93□□□□□ -0.18
CXCL12-201ENST00000343575 ANKRD26P1Q6NSI1 321 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 SLC2A7Q6PXP3 512 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 MCATQ8IVS2 390 aaKnown RBP13.93□□□□□ -0.18
CXCL12-201ENST00000343575 ANKFN1Q8N957 763 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 GOLM1Q8NBJ4 401 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 TCTN2Q96GX1 697 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 QRFPRQ96P65 431 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 CD180Q99467 661 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 CCDC3Q9BQI4 270 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 CHRNA10Q9GZZ6 450 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 MYNNQ9NPC7 610 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 STARD5Q9NSY2 213 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 ADAM29Q9UKF5 820 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 ATXN7L1Q9ULK2 861 aaPredicted RBP13.93□□□□□ -0.18
CXCL12-201ENST00000343575 NEUROG3Q9Y4Z2 214 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 CCDC154A6NI56 674 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 BBIP1A8MTZ0 92 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 SCAMP2O15127 329 aaKnown RBP13.93□□□□□ -0.18
CXCL12-201ENST00000343575 PRMT3O60678 531 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 DNAJB6O75190 326 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 MED26O95402 600 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 ZNF888P0CJ79 500 aaPredicted RBP13.93□□□□□ -0.18
CXCL12-201ENST00000343575 ATP5A1P25705 553 aaKnown RBP13.93□□□□□ -0.18
CXCL12-201ENST00000343575 ARFIP1P53367 373 aa13.93□□□□□ -0.18
CXCL12-201ENST00000343575 VSX2P58304 361 aaPredicted RBP13.93□□□□□ -0.18
CXCL12-201ENST00000343575 CCL7P80098 99 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms