RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 BCL2L15Q5TBC7 163 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 B3GNTL1Q67FW5 361 aaPredicted RBP7.79□□□□□ -1.16
ATG4A-201ENST00000343524 OVOS1Q6IE37 1185 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 RGS7BPQ6MZT1 257 aaPredicted RBP7.79□□□□□ -1.16
ATG4A-201ENST00000343524 MCATQ8IVS2 390 aaKnown RBP7.79□□□□□ -1.16
ATG4A-201ENST00000343524 TP53INP2Q8IXH6 220 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 CPXCR1Q8N123 301 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 STPG2Q8N412 459 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 PGBD5Q8N414 524 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 BVESQ8NE79 360 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 TRPV1Q8NER1 839 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 OR1M1Q8NGA1 313 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 SCARB1Q8WTV0 552 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 SCRN2Q96FV2 425 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 NELL2Q99435 816 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 MYOCQ99972 504 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 ZNF251Q9BRH9 671 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 C7orf50Q9BRJ6 194 aaKnown RBP7.79□□□□□ -1.16
ATG4A-201ENST00000343524 TCEAL7Q9BRU2 100 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 CINPQ9BW66 212 aaPredicted RBP7.79□□□□□ -1.16
ATG4A-201ENST00000343524 RBCK1Q9BYM8 510 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 SLC29A3Q9BZD2 475 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 POLR2J2Q9GZM3 115 aaKnown RBP7.79□□□□□ -1.16
ATG4A-201ENST00000343524 BRD7Q9NPI1 651 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 FBXW11Q9UKB1 542 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 CORO2BQ9UQ03 480 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 DERAQ9Y315 318 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 RPL36Q9Y3U8 105 aaKnown RBP7.79□□□□□ -1.16
ATG4A-201ENST00000343524 EYSQ5T1H1 3165 aa7.79□□□□□ -1.16
ATG4A-201ENST00000343524 SYNJ2BP-COX16A0A087WUM0 186 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 DNASE2O00115 360 aaPredicted RBP7.78□□□□□ -1.16
ATG4A-201ENST00000343524 WRBO00258 174 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 WNT10BO00744 389 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 PDCD5O14737 125 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 FGF10O15520 208 aaPredicted RBP7.78□□□□□ -1.16
ATG4A-201ENST00000343524 SLC28A2O43868 658 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 GLUD1P00367 558 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 SULT1A3P0DMM9 295 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 SULT1A4P0DMN0 295 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 TYRP14679 529 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 APEX1P27695 318 aaKnown RBP7.78□□□□□ -1.16
ATG4A-201ENST00000343524 POU1F1P28069 291 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 CTGFP29279 349 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 SLC6A4P31645 630 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 ICAM3P32942 547 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 S100A3P33764 101 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 SOX3P41225 446 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 EVX1P49640 407 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 STK19P49842 368 aaPredicted RBP7.78□□□□□ -1.16
ATG4A-201ENST00000343524 PLIN5Q00G26 463 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 BAATQ14032 418 aaPredicted RBP7.78□□□□□ -1.16
ATG4A-201ENST00000343524 OPCMLQ14982 345 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 GPR68Q15743 365 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 PTCHD3Q3KNS1 767 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 PLA1AQ53H76 456 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 FAM26DQ5JW98 314 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 SCIMPQ6UWF3 145 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 TREML4Q6UXN2 200 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 PTCHD4Q6ZW05 846 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 SHFQ7M4L6 423 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 CCDC36Q8IYA8 594 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 PHACTR4Q8IZ21 702 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 LIX1Q8N485 282 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 FTMTQ8N4E7 242 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 LRRC52Q8N7C0 313 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 DCBLD1Q8N8Z6 715 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 FAM46DQ8NEK8 389 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 OR11H7Q8NGC8 314 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 OR6S1Q8NH40 331 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 ASB12Q8WXK4 309 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 KCTD13Q8WZ19 329 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 NSMAFQ92636 917 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 KCNJ9Q92806 393 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 NELL1Q92832 810 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 UROC1Q96N76 676 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 MRPL45Q9BRJ2 306 aaKnown RBP7.78□□□□□ -1.16
ATG4A-201ENST00000343524 H2AFJQ9BTM1 129 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 HDHD2Q9H0R4 259 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 TTYH1Q9H313 450 aaPredicted RBP7.78□□□□□ -1.16
ATG4A-201ENST00000343524 EQTNQ9NQ60 294 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 PIGVQ9NUD9 493 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 SIRT5Q9NXA8 310 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 COX16Q9P0S2 106 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 PRKAG2Q9UGJ0 569 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 HCN2Q9UL51 889 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 ASB1Q9Y576 335 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 NPTNQ9Y639 398 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 RALGAPA2Q2PPJ7 1873 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 ANKDD1BA6NHY2 528 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 ARVCFO00192 962 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 HAS3O00219 553 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 E2F3O00716 465 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 SUV39H1O43463 412 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 PRAF2O60831 178 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 FABP1P07148 127 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 PRPS2P11908 318 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 UGT2B7P16662 529 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 CPEP16870 476 aa7.78□□□□□ -1.16
ATG4A-201ENST00000343524 PPIBP23284 216 aaKnown RBP7.78□□□□□ -1.16
ATG4A-201ENST00000343524 ADORA2BP29275 332 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms