RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 NECTIN3Q9NQS3 549 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 XPR1Q9UBH6 696 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 HECTD1Q9ULT8 2610 aa12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 USP9XQ93008 2570 aaPredicted RBP12.48□□□□□ -0.41
SIRPB3P-201ENST00000340424 IQANK1A0A1B0GTG1 560 aa12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 CCDC151A5D8V7 595 aa12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 FOXE1O00358 373 aaPredicted RBP12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 FCHO1O14526 889 aa12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 MYO1DO94832 1006 aa12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 RASAL1O95294 804 aa12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 CLDN9O95484 217 aa12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 CLCN2P51788 898 aa12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 RAP1GDS1P52306 607 aa12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 CUL3Q13618 768 aa12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 TUBA3CQ13748 450 aa12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 SERTAD2Q14140 314 aa12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 ELAVL1Q15717 326 aaKnown RBP12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 OR4C11Q6IEV9 310 aa12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 TUBA3EQ6PEY2 450 aa12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 THSD4Q6ZMP0 1018 aa12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 PLD6Q8N2A8 252 aaKnown RBP12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 TMEM132CQ8N3T6 1108 aa12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 ZCCHC7Q8N3Z6 543 aaKnown RBP12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 FAM47BQ8NA70 645 aa12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 TMEM178AQ8NBL3 297 aa12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 NFAM1Q8NET5 270 aaPredicted RBP12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 PRR7Q8TB68 274 aa12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 SSC4DQ8WTU2 575 aa12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 NR4A3Q92570 626 aa12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 DAZLQ92904 295 aaKnown RBP12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 KCTD12Q96CX2 325 aaKnown RBP12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 VMP1Q96GC9 406 aa12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 SCYL1Q96KG9 808 aa12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 CCDC77Q9BR77 488 aa12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 DMRT3Q9NQL9 472 aa12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 KCMF1Q9P0J7 381 aa12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 RAB21Q9UL25 225 aa12.47□□□□□ -0.41
SIRPB3P-201ENST00000340424 GABRR3A8MPY1 467 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 SIX3O95343 332 aaPredicted RBP12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 MLYCDO95822 493 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 TGFB1P01137 390 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 RHOXF2BP0C7M4 288 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 EEF1DP29692 281 aaKnown RBP12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 PPP2R1BP30154 601 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 TLX1P31314 330 aaPredicted RBP12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 TRHRP34981 398 aaPredicted RBP12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 CCNG1P51959 295 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 STX4Q12846 297 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 OR1C1Q15619 314 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 CPSF6Q16630 551 aaKnown RBP eCLIP12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 EIF2S3LQ2VIR3 472 aaKnown RBP12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 GGTA1PQ4G0N0 100 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 ZNF766Q5HY98 468 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 ZNF324BQ6AW86 544 aaPredicted RBP12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 ZNF793Q6ZN11 406 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 UBE3DQ7Z6J8 389 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 FAM98AQ8NCA5 519 aaKnown RBP12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 APCDD1LQ8NCL9 501 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 MDS2Q8NDY4 140 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 OR14A16Q8NHC5 309 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 UHMK1Q8TAS1 419 aaKnown RBP12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 ACMSDQ8TDX5 336 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 SCMH1Q96GD3 660 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 C5orf34Q96MH7 638 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 NPAS2Q99743 824 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 RHOXF2Q9BQY4 288 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 NTMT1Q9BV86 223 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 C1QTNF3Q9BXJ4 246 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 DEFB126Q9BYW3 111 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 NOL11Q9H8H0 719 aaKnown RBP12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 TRIM45Q9H8W5 580 aaPredicted RBP12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 PPCSQ9HAB8 311 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 PSMC3IPQ9P2W1 217 aaPredicted RBP12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 VTI1BQ9UEU0 232 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 PHF11Q9UIL8 331 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 PCTPQ9UKL6 214 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 SLC5A6Q9Y289 635 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 CLDN16Q9Y5I7 305 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 CLCA3PQ9Y6N3 262 aa12.46□□□□□ -0.41
SIRPB3P-201ENST00000340424 SEMA3DO95025 777 aa12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 F10P00742 488 aa12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 TAC1P20366 129 aa12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 CPN2P22792 545 aa12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 CD96P40200 585 aa12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 BUD31P41223 144 aaPredicted RBP12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 CYB561P49447 251 aa12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 MLF1P58340 268 aa12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 OC90Q02509 493 aaPredicted RBP12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 DDX39BQ13838 428 aaKnown RBP12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 FCRLBQ6BAA4 426 aa12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 MORN4Q8NDC4 146 aa12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 TMEM52Q8NDY8 209 aa12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 WDR20Q8TBZ3 569 aa12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 TANKQ92844 425 aa12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 ATP6V1E2Q96A05 226 aa12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 PHF21BQ96EK2 531 aa12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 PSMG3-AS1Q96PY0 264 aa12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 TAAR6Q96RI8 345 aa12.45□□□□□ -0.42
SIRPB3P-201ENST00000340424 CSF3RQ99062 836 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms