RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 COMMD6Q7Z4G1 85 aa13.37□□□□□ -0.27
CTSL-201ENST00000340342 ZNF605Q86T29 641 aa13.37□□□□□ -0.27
CTSL-201ENST00000340342 ARFGAP2Q8N6H7 521 aa13.37□□□□□ -0.27
CTSL-201ENST00000340342 OR11G2Q8NGC1 345 aa13.37□□□□□ -0.27
CTSL-201ENST00000340342 VPS50Q96JG6 964 aa13.37□□□□□ -0.27
CTSL-201ENST00000340342 DDX31Q9H8H2 851 aaKnown RBP13.37□□□□□ -0.27
CTSL-201ENST00000340342 LYRM4Q9HD34 91 aa13.37□□□□□ -0.27
CTSL-201ENST00000340342 FBXW2Q9UKT8 454 aa13.37□□□□□ -0.27
CTSL-201ENST00000340342 IGHV3-20A0A0C4DH32 117 aa13.36□□□□□ -0.27
CTSL-201ENST00000340342 CYR61O00622 381 aa13.36□□□□□ -0.27
CTSL-201ENST00000340342 AZIN1O14977 448 aa13.36□□□□□ -0.27
CTSL-201ENST00000340342 PRKRAO75569 313 aaKnown RBP13.36□□□□□ -0.27
CTSL-201ENST00000340342 SERPINE1P05121 402 aa13.36□□□□□ -0.27
CTSL-201ENST00000340342 UROSP10746 265 aa13.36□□□□□ -0.27
CTSL-201ENST00000340342 HSD3B1P14060 373 aa13.36□□□□□ -0.27
CTSL-201ENST00000340342 IL10P22301 178 aa13.36□□□□□ -0.27
CTSL-201ENST00000340342 JAK1P23458 1154 aa13.36□□□□□ -0.27
CTSL-201ENST00000340342 HSD3B2P26439 372 aa13.36□□□□□ -0.27
CTSL-201ENST00000340342 TSFMP43897 325 aaKnown RBP13.36□□□□□ -0.27
CTSL-201ENST00000340342 CCL11P51671 97 aa13.36□□□□□ -0.27
CTSL-201ENST00000340342 HNRNPH2P55795 449 aaKnown RBP13.36□□□□□ -0.27
CTSL-201ENST00000340342 NSDHLQ15738 373 aa13.36□□□□□ -0.27
CTSL-201ENST00000340342 TUBB8Q3ZCM7 444 aa13.36□□□□□ -0.27
CTSL-201ENST00000340342 SH2D4BQ5SQS7 431 aa13.36□□□□□ -0.27
CTSL-201ENST00000340342 KANK2Q63ZY3 851 aa13.36□□□□□ -0.27
CTSL-201ENST00000340342 TMEM205Q6UW68 189 aa13.36□□□□□ -0.27
CTSL-201ENST00000340342 NUDT13Q86X67 352 aa13.36□□□□□ -0.27
CTSL-201ENST00000340342 METTL4Q8N3J2 472 aa13.36□□□□□ -0.27
CTSL-201ENST00000340342 ZCCHC7Q8N3Z6 543 aaKnown RBP13.36□□□□□ -0.27
CTSL-201ENST00000340342 EFCAB3Q8N7B9 438 aa13.36□□□□□ -0.27
CTSL-201ENST00000340342 FAM76AQ8TAV0 307 aa13.36□□□□□ -0.27
CTSL-201ENST00000340342 C20orf27Q9GZN8 174 aa13.36□□□□□ -0.27
CTSL-201ENST00000340342 NECTIN3Q9NQS3 549 aa13.36□□□□□ -0.27
CTSL-201ENST00000340342 NKIRAS1Q9NYS0 192 aa13.36□□□□□ -0.27
CTSL-201ENST00000340342 VPS29Q9UBQ0 182 aa13.36□□□□□ -0.27
CTSL-201ENST00000340342 G3BP2Q9UN86 482 aaKnown RBP13.36□□□□□ -0.27
CTSL-201ENST00000340342 ATG4BQ9Y4P1 393 aa13.36□□□□□ -0.27
CTSL-201ENST00000340342 PCDHGA9Q9Y5G4 932 aaKnown RBP13.36□□□□□ -0.27
CTSL-201ENST00000340342 CNTRLQ7Z7A1 2325 aa13.36□□□□□ -0.27
CTSL-201ENST00000340342 SPTA1P02549 2419 aa13.36□□□□□ -0.27
CTSL-201ENST00000340342 MYOCOSA0A1B0GUC4 107 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 TGFBR3LH3BV60 316 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 PRMT3O60678 531 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 CEACAM4O75871 244 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 NEFHP12036 1026 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 COX6A1P12074 109 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 CPN2P22792 545 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 TPP2P29144 1249 aaPredicted RBP13.35□□□□□ -0.27
CTSL-201ENST00000340342 SERPINB5P36952 375 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 ARFIP1P53367 373 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 SLC18A1P54219 525 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 BTKQ06187 659 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 LACTB2Q53H82 288 aaPredicted RBP13.35□□□□□ -0.27
CTSL-201ENST00000340342 DCAF10Q5QP82 559 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 C18orf63Q68DL7 685 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 CYP20A1Q6UW02 462 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 QSOX2Q6ZRP7 698 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 ANKRD37Q7Z713 158 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 CLNKQ7Z7G1 428 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 GPR180Q86V85 440 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 C1orf52Q8N6N3 182 aaKnown RBP13.35□□□□□ -0.27
CTSL-201ENST00000340342 GBP7Q8N8V2 638 aaPredicted RBP13.35□□□□□ -0.27
CTSL-201ENST00000340342 CLEC1AQ8NC01 280 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 METTL21AQ8WXB1 218 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 APIPQ96GX9 242 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 PTCHD1Q96NR3 888 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 SLC25A23Q9BV35 468 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 TUBB1Q9H4B7 451 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 EML4Q9HC35 981 aaKnown RBP13.35□□□□□ -0.27
CTSL-201ENST00000340342 ZNF160Q9HCG1 818 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 ZNF71Q9NQZ8 489 aaPredicted RBP13.35□□□□□ -0.27
CTSL-201ENST00000340342 ZDHHC2Q9UIJ5 367 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 TRAF6Q9Y4K3 522 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 ASB4Q9Y574 426 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 PCDHGB7Q9Y5F8 929 aa13.35□□□□□ -0.27
CTSL-201ENST00000340342 LOC102723996A0A087X1L8 192 aa13.34□□□□□ -0.27
CTSL-201ENST00000340342 IGKV3D-11A0A0A0MRZ8 115 aa13.34□□□□□ -0.27
CTSL-201ENST00000340342 IGHV1-45A0A0A0MS14 117 aa13.34□□□□□ -0.27
CTSL-201ENST00000340342 ARHGAP10A1A4S6 786 aa13.34□□□□□ -0.27
CTSL-201ENST00000340342 A6NL46 340 aa13.34□□□□□ -0.27
CTSL-201ENST00000340342 PCDH17O14917 1159 aa13.34□□□□□ -0.27
CTSL-201ENST00000340342 POLR3GO15318 223 aaPredicted RBP13.34□□□□□ -0.27
CTSL-201ENST00000340342 KLHL41O60662 606 aa13.34□□□□□ -0.27
CTSL-201ENST00000340342 SEC24DO94855 1032 aaPredicted RBP13.34□□□□□ -0.27
CTSL-201ENST00000340342 HSPA4LO95757 839 aa13.34□□□□□ -0.27
CTSL-201ENST00000340342 FAM58BPP0C7Q3 252 aa13.34□□□□□ -0.27
CTSL-201ENST00000340342 SOX8P57073 446 aa13.34□□□□□ -0.27
CTSL-201ENST00000340342 ABCE1P61221 599 aaKnown RBP13.34□□□□□ -0.27
CTSL-201ENST00000340342 SLC13A2Q13183 592 aa13.34□□□□□ -0.27
CTSL-201ENST00000340342 RAPSNQ13702 412 aa13.34□□□□□ -0.27
CTSL-201ENST00000340342 PCOLCEQ15113 449 aa13.34□□□□□ -0.27
CTSL-201ENST00000340342 UGT3A2Q3SY77 523 aa13.34□□□□□ -0.27
CTSL-201ENST00000340342 SPDYAQ5MJ70 313 aa13.34□□□□□ -0.27
CTSL-201ENST00000340342 CCNYL2Q5T2Q4 361 aa13.34□□□□□ -0.27
CTSL-201ENST00000340342 MRM1Q6IN84 353 aaKnown RBP13.34□□□□□ -0.27
CTSL-201ENST00000340342 PAGE2Q7Z2X7 111 aa13.34□□□□□ -0.27
CTSL-201ENST00000340342 SCUBE1Q8IWY4 988 aa13.34□□□□□ -0.27
CTSL-201ENST00000340342 PLPP5Q8NEB5 264 aa13.34□□□□□ -0.27
CTSL-201ENST00000340342 ADAMTS18Q8TE60 1221 aa13.34□□□□□ -0.27
CTSL-201ENST00000340342 UCN3Q969E3 161 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms