RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 MMACHCQ9Y4U1 282 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 ACTL7BQ9Y614 415 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 SPACA6W5XKT8 324 aa14.32□□□□□ -0.12
UBE3B-201ENST00000340074 SPENQ96T58 3664 aaKnown RBP14.31□□□□□ -0.12
UBE3B-201ENST00000340074 CNTRLQ7Z7A1 2325 aa14.31□□□□□ -0.12
UBE3B-201ENST00000340074 TCRBV16S1A1N1A0A5B0 115 aa14.31□□□□□ -0.12
UBE3B-201ENST00000340074 H3BQF6 201 aa14.31□□□□□ -0.12
UBE3B-201ENST00000340074 TGFBR3LH3BV60 316 aa14.31□□□□□ -0.12
UBE3B-201ENST00000340074 TMPRSS11DO60235 418 aa14.31□□□□□ -0.12
UBE3B-201ENST00000340074 BPGMP07738 259 aa14.31□□□□□ -0.12
UBE3B-201ENST00000340074 PRR35P0CG20 571 aa14.31□□□□□ -0.12
UBE3B-201ENST00000340074 CPN2P22792 545 aa14.31□□□□□ -0.12
UBE3B-201ENST00000340074 HNRNPH2P55795 449 aaKnown RBP14.31□□□□□ -0.12
UBE3B-201ENST00000340074 HSD17B7P56937 341 aa14.31□□□□□ -0.12
UBE3B-201ENST00000340074 PAPD4Q6PIY7 484 aaKnown RBP14.31□□□□□ -0.12
UBE3B-201ENST00000340074 SCIMPQ6UWF3 145 aa14.31□□□□□ -0.12
UBE3B-201ENST00000340074 ZCCHC23Q6ZST2 131 aa14.31□□□□□ -0.12
UBE3B-201ENST00000340074 CLNKQ7Z7G1 428 aa14.31□□□□□ -0.12
UBE3B-201ENST00000340074 GPR180Q86V85 440 aa14.31□□□□□ -0.12
UBE3B-201ENST00000340074 PTRH1Q86Y79 214 aaKnown RBP14.31□□□□□ -0.12
UBE3B-201ENST00000340074 SCUBE1Q8IWY4 988 aa14.31□□□□□ -0.12
UBE3B-201ENST00000340074 KBTBD2Q8IY47 623 aa14.31□□□□□ -0.12
UBE3B-201ENST00000340074 METTL4Q8N3J2 472 aa14.31□□□□□ -0.12
UBE3B-201ENST00000340074 EFCAB3Q8N7B9 438 aa14.31□□□□□ -0.12
UBE3B-201ENST00000340074 LPAR4Q99677 370 aa14.31□□□□□ -0.12
UBE3B-201ENST00000340074 LHPPQ9H008 270 aa14.31□□□□□ -0.12
UBE3B-201ENST00000340074 STMN4Q9H169 189 aaPredicted RBP14.31□□□□□ -0.12
UBE3B-201ENST00000340074 ZNF552Q9H707 407 aaPredicted RBP14.31□□□□□ -0.12
UBE3B-201ENST00000340074 AHSPQ9NZD4 102 aa14.31□□□□□ -0.12
UBE3B-201ENST00000340074 PHF11Q9UIL8 331 aa14.31□□□□□ -0.12
UBE3B-201ENST00000340074 ATG4BQ9Y4P1 393 aa14.31□□□□□ -0.12
UBE3B-201ENST00000340074 CLDN16Q9Y5I7 305 aa14.31□□□□□ -0.12
UBE3B-201ENST00000340074 TM9SF1O15321 606 aa14.3□□□□□ -0.12
UBE3B-201ENST00000340074 LDB3O75112 727 aa14.3□□□□□ -0.12
UBE3B-201ENST00000340074 CRCPO75575 148 aa14.3□□□□□ -0.12
UBE3B-201ENST00000340074 KLK1P06870 262 aa14.3□□□□□ -0.12
UBE3B-201ENST00000340074 FAM58BPP0C7Q3 252 aa14.3□□□□□ -0.12
UBE3B-201ENST00000340074 ICAM2P13598 275 aa14.3□□□□□ -0.12
UBE3B-201ENST00000340074 HSD3B1P14060 373 aa14.3□□□□□ -0.12
UBE3B-201ENST00000340074 CHN1P15882 459 aa14.3□□□□□ -0.12
UBE3B-201ENST00000340074 HSD3B2P26439 372 aa14.3□□□□□ -0.12
UBE3B-201ENST00000340074 SERPINB3P29508 390 aa14.3□□□□□ -0.12
UBE3B-201ENST00000340074 TNFRSF17Q02223 184 aa14.3□□□□□ -0.12
UBE3B-201ENST00000340074 GALNT1Q10472 559 aaPredicted RBP14.3□□□□□ -0.12
UBE3B-201ENST00000340074 TBL3Q12788 808 aaKnown RBP14.3□□□□□ -0.12
UBE3B-201ENST00000340074 CSTF3Q12996 717 aaKnown RBP14.3□□□□□ -0.12
UBE3B-201ENST00000340074 MPP2Q14168 576 aa14.3□□□□□ -0.12
UBE3B-201ENST00000340074 BTBD16Q32M84 506 aa14.3□□□□□ -0.12
UBE3B-201ENST00000340074 VWA5B1Q5TIE3 1220 aa14.3□□□□□ -0.12
UBE3B-201ENST00000340074 IRAK1BP1Q5VVH5 260 aa14.3□□□□□ -0.12
UBE3B-201ENST00000340074 C18orf63Q68DL7 685 aa14.3□□□□□ -0.12
UBE3B-201ENST00000340074 MRM1Q6IN84 353 aaKnown RBP14.3□□□□□ -0.12
UBE3B-201ENST00000340074 TRMOQ9BU70 441 aa14.3□□□□□ -0.12
UBE3B-201ENST00000340074 ACPTQ9BZG2 426 aa14.3□□□□□ -0.12
UBE3B-201ENST00000340074 TMBIM4Q9HC24 238 aa14.3□□□□□ -0.12
UBE3B-201ENST00000340074 KCNK9Q9NPC2 374 aa14.3□□□□□ -0.12
UBE3B-201ENST00000340074 NMRK1Q9NWW6 199 aa14.3□□□□□ -0.12
UBE3B-201ENST00000340074 LYARQ9NX58 379 aaKnown RBP14.3□□□□□ -0.12
UBE3B-201ENST00000340074 MS4A12Q9NXJ0 267 aa14.3□□□□□ -0.12
UBE3B-201ENST00000340074 VPS29Q9UBQ0 182 aa14.3□□□□□ -0.12
UBE3B-201ENST00000340074 ZNF451Q9Y4E5 1061 aa14.3□□□□□ -0.12
UBE3B-201ENST00000340074 ASB4Q9Y574 426 aa14.3□□□□□ -0.12
UBE3B-201ENST00000340074 MYOCOSA0A1B0GUC4 107 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 WDR91A4D1P6 747 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 GOLGA6L10A6NI86 522 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 A8MUA0 341 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 PROM1O43490 865 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 NPHS1O60500 1241 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 KLHL41O60662 606 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 CTNSO60931 367 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 PRKRAO75569 313 aaKnown RBP14.29□□□□□ -0.12
UBE3B-201ENST00000340074 ZWINTO95229 277 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 SERPINA7P05543 415 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 CHRNGP07510 517 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 ITGAMP11215 1152 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 H2AFXP16104 143 aaPredicted RBP14.29□□□□□ -0.12
UBE3B-201ENST00000340074 TPP2P29144 1249 aaPredicted RBP14.29□□□□□ -0.12
UBE3B-201ENST00000340074 SERPINB4P48594 390 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 HMGCS1Q01581 520 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 ZNF33BQ06732 778 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 CCNYL2Q5T2Q4 361 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 AGAP7PQ5VUJ5 663 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 PLAG1Q6DJT9 500 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 CLEC6AQ6EIG7 209 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 RIPOR1Q6ZS17 1223 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 PAGE2Q7Z2X7 111 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 COMMD6Q7Z4G1 85 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 CUZD1Q86UP6 607 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 NUDCD3Q8IVD9 361 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 GBP7Q8N8V2 638 aaPredicted RBP14.29□□□□□ -0.12
UBE3B-201ENST00000340074 BRIX1Q8TDN6 353 aaKnown RBP14.29□□□□□ -0.12
UBE3B-201ENST00000340074 SREK1Q8WXA9 508 aaKnown RBP14.29□□□□□ -0.12
UBE3B-201ENST00000340074 PKNOX2Q96KN3 472 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 AGAP4Q96P64 663 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 RPF2Q9H7B2 306 aaKnown RBP14.29□□□□□ -0.12
UBE3B-201ENST00000340074 ZBTB20Q9HC78 741 aaPredicted RBP14.29□□□□□ -0.12
UBE3B-201ENST00000340074 ADAM29Q9UKF5 820 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 PCDHGB7Q9Y5F8 929 aa14.29□□□□□ -0.12
UBE3B-201ENST00000340074 A0A1W2PR48 441 aa14.28□□□□□ -0.12
UBE3B-201ENST00000340074 ARHGAP10A1A4S6 786 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms