RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 FIZ1Q96SL8 496 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 NDC1Q9BTX1 674 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 BOCQ9BWV1 1114 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 TMEM5Q9Y2B1 443 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 PCDHGA8Q9Y5G5 932 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 SPATA31A6Q5VVP1 1343 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 A0A1W2PQL4 384 aaPredicted RBP8.37□□□□□ -1.07
RTN3-202ENST00000339997 C7orf72A4D263 438 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 E7EQ34 232 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 F5H0A9 414 aaPredicted RBP8.37□□□□□ -1.07
RTN3-202ENST00000339997 G3V2L1 256 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 CAPN5O15484 640 aaPredicted RBP8.37□□□□□ -1.07
RTN3-202ENST00000339997 EDNRBP24530 442 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 CTSOP43234 321 aaPredicted RBP8.37□□□□□ -1.07
RTN3-202ENST00000339997 DGKGP49619 791 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 RAB15P59190 212 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 FAM76BQ5HYJ3 339 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 PRAMEF14Q5SWL7 426 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 GPRC6AQ5T6X5 926 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 GARNL3Q5VVW2 1013 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 PRAMEF13Q5VWM6 474 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 HAGHLQ6PII5 290 aaPredicted RBP8.37□□□□□ -1.07
RTN3-202ENST00000339997 CEACAM19Q7Z692 300 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 SLC5A8Q8N695 610 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 SH3RF2Q8TEC5 729 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 IGSF8Q969P0 613 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 SEZ6LQ9BYH1 1024 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 HAPLN2Q9GZV7 340 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 OR10A4Q9H209 315 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 SRMSQ9H3Y6 488 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 SMURF1Q9HCE7 757 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 MRPS30Q9NP92 439 aaKnown RBP8.37□□□□□ -1.07
RTN3-202ENST00000339997 FBXL21Q9UKT6 434 aa8.37□□□□□ -1.07
RTN3-202ENST00000339997 CDH23Q9H251 3354 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 COL22A1Q8NFW1 1626 aaPredicted RBP8.36□□□□□ -1.07
RTN3-202ENST00000339997 SPTBN5Q9NRC6 3674 aaKnown RBP8.36□□□□□ -1.07
RTN3-202ENST00000339997 FAM171A2A8MVW0 826 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 CTDSP2O14595 271 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 FRS3O43559 492 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 FAM189A1O60320 539 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 S1PR4O95977 384 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 OAS1P00973 400 aaKnown RBP8.36□□□□□ -1.07
RTN3-202ENST00000339997 C8AP07357 584 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 IL7P13232 177 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 MAP4K2Q12851 820 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 FCRLBQ6BAA4 426 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 NCEH1Q6PIU2 408 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 BLOC1S3Q6QNY0 202 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 CARM1Q86X55 608 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 OR4N5Q8IXE1 308 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 MINDY2Q8NBR6 621 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 OR13J1Q8NGT2 312 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 GAB3Q8WWW8 586 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 TFGQ92734 400 aaPredicted RBP8.36□□□□□ -1.07
RTN3-202ENST00000339997 ZUFSPQ96AP4 578 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 C3orf30Q96M34 536 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 SLC6A7Q99884 636 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 C7orf50Q9BRJ6 194 aaKnown RBP8.36□□□□□ -1.07
RTN3-202ENST00000339997 INPP5KQ9BT40 448 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 OCEL1Q9H607 264 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 TBCCD1Q9NVR7 557 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 LYARQ9NX58 379 aaKnown RBP8.36□□□□□ -1.07
RTN3-202ENST00000339997 ZNF226Q9NYT6 803 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 P2RX2Q9UBL9 471 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 MAB21L2Q9Y586 359 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 DISC1C4P0D8 188 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 PMM2O15305 246 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 SNNO75324 88 aaPredicted RBP8.36□□□□□ -1.07
RTN3-202ENST00000339997 GJB5O95377 273 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 ZBTB48P10074 688 aaPredicted RBP8.36□□□□□ -1.07
RTN3-202ENST00000339997 SNTB2Q13425 540 aaKnown RBP8.36□□□□□ -1.07
RTN3-202ENST00000339997 TUBA3CQ13748 450 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 DSG2Q14126 1118 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 PTGES3Q15185 160 aaKnown RBP8.36□□□□□ -1.07
RTN3-202ENST00000339997 PDGFRLQ15198 375 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 FBXO43Q4G163 708 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 DCDC5Q6ZRR9 648 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 TMEM135Q86UB9 458 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 SERPINA12Q8IW75 414 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 OR2T35Q8NGX2 323 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 DEDD2Q8WXF8 326 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 SORT1Q99523 831 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 TSNAXQ99598 290 aaKnown RBP8.36□□□□□ -1.07
RTN3-202ENST00000339997 GTPBP2Q9BX10 602 aaKnown RBP8.36□□□□□ -1.07
RTN3-202ENST00000339997 LGR4Q9BXB1 951 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 CD244Q9BZW8 370 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 DERL2Q9GZP9 239 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 CARS2Q9HA77 564 aaKnown RBP8.36□□□□□ -1.07
RTN3-202ENST00000339997 MEAF6Q9HAF1 191 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 TRIM36Q9NQ86 728 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 ZDHHC3Q9NYG2 299 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 EDARQ9UNE0 448 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 HIF3AQ9Y2N7 669 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 ZNF646O15015 1829 aaPredicted RBP8.36□□□□□ -1.07
RTN3-202ENST00000339997 NID2Q14112 1375 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 C11orf98E9PRG8 122 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 AGPAT2O15120 278 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 LATO43561 262 aa8.36□□□□□ -1.07
RTN3-202ENST00000339997 FARS2O95363 451 aaKnown RBP8.36□□□□□ -1.07
RTN3-202ENST00000339997 VIPR1P32241 457 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms