RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 MLLT3P42568 568 aaPredicted RBP12.39□□□□□ -0.43
USP47-202ENST00000339865 ASPAP45381 313 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 DGKQP52824 942 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 IRF9Q00978 393 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 GALK2Q01415 458 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 DSC2Q02487 901 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 MOB1BQ7L9L4 216 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 GLIS3Q8NEA6 775 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 GTF2H4Q92759 462 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 KLK6Q92876 244 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 TGM7Q96PF1 710 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 ZNF442Q9H7R0 627 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 DICER1Q9UPY3 1922 aaKnown RBP12.39□□□□□ -0.43
USP47-202ENST00000339865 ZIC2O95409 532 aaPredicted RBP12.39□□□□□ -0.43
USP47-202ENST00000339865 KNG1P01042 644 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 OR1E2P47887 323 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 ACY1Q03154 408 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 SEC23AQ15436 765 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 HPSE2Q8WWQ2 592 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 AKTIPQ9H8T0 292 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 B3GNT2Q9NY97 397 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 PTCH2Q9Y6C5 1203 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 SEC14L6B5MCN3 397 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 K7EPI3 171 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 PRICKLE3O43900 615 aaPredicted RBP12.39□□□□□ -0.43
USP47-202ENST00000339865 PIGRP01833 764 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 RPL13AP40429 203 aaKnown RBP12.39□□□□□ -0.43
USP47-202ENST00000339865 ACTA2P62736 377 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 ACTG2P63267 376 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 ACTC1P68032 377 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 ACTA1P68133 377 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 TRAM1Q15629 374 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 HMGB4Q8WW32 186 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 C22orf15Q8WYQ4 148 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 BTN2A3PQ96KV6 586 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 CPXM1Q96SM3 734 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 SLC2A8Q9NY64 477 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 CNTN6Q9UQ52 1028 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 CYTIPO60759 359 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 AGXTP21549 392 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 TGFB2P61812 414 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 CSNK2A1P68400 391 aaPredicted RBP12.39□□□□□ -0.43
USP47-202ENST00000339865 MRPL49Q13405 166 aaKnown RBP12.39□□□□□ -0.43
USP47-202ENST00000339865 COQ5Q5HYK3 327 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 CST9LP1Q5W188 147 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 PHF13Q86YI8 300 aaPredicted RBP12.39□□□□□ -0.43
USP47-202ENST00000339865 LINC00471Q8N535 108 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 TMEM156Q8N614 296 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 CSNK2A3Q8NEV1 391 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 ZNF420Q8TAQ5 688 aaPredicted RBP12.39□□□□□ -0.43
USP47-202ENST00000339865 INPP4AQ96PE3 977 aaPredicted RBP12.39□□□□□ -0.43
USP47-202ENST00000339865 PORCNQ9H237 461 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 HRH4Q9H3N8 390 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 MAS1P04201 325 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 HMGCS1Q01581 520 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 SLC10A1Q14973 349 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 OR5B17Q8NGF7 314 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 OR5H2Q8NGV7 314 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 ZNF681Q96N22 645 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 CSPG4P5Q96PW8 444 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 URM1Q9BTM9 101 aaKnown RBP12.39□□□□□ -0.43
USP47-202ENST00000339865 METTL7AQ9H8H3 244 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 CREBZFQ9NS37 354 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 PUS1Q9Y606 427 aaKnown RBP eCLIP12.39□□□□□ -0.43
USP47-202ENST00000339865 SCN3AQ9NY46 2000 aa12.39□□□□□ -0.43
USP47-202ENST00000339865 DOCK8Q8NF50 2099 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 SC5DO75845 299 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 GBAP04062 536 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 H2BFMP0C1H6 154 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 GP1BBP13224 206 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 NSG1P42857 185 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 ZNF41P51814 821 aaPredicted RBP12.38□□□□□ -0.43
USP47-202ENST00000339865 IQCKQ8N0W5 287 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 OR56A1Q8NGH5 318 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 ZNF286AQ9HBT8 521 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 DNAJB4Q9UDY4 337 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 PCDHGC4Q9Y5F7 938 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 MPDZO75970 2070 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 ASGR1P07306 291 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 TNFSF9P41273 254 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 PRKCIP41743 596 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 MAP2K4P45985 399 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 EEFSECP57772 596 aaKnown RBP12.38□□□□□ -0.43
USP47-202ENST00000339865 HERVK_113P63132 956 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 AQP12AQ8IXF9 295 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 SH3YL1Q96HL8 342 aaPredicted RBP12.38□□□□□ -0.43
USP47-202ENST00000339865 GATA5Q9BWX5 397 aaPredicted RBP12.38□□□□□ -0.43
USP47-202ENST00000339865 GPR75-ASB3A0A0A6YYF3 556 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 TAS2R20P59543 309 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 ZNF425Q6IV72 752 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 IFNL1Q8IU54 200 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 OR56A3Q8NH54 315 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 CRAMP1Q96RY5 1269 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 DNAJC5BQ9UF47 199 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 C2orf72A6NCS6 295 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 BTNL10A8MVZ5 291 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 CD6P30203 668 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 FCER1GP30273 86 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 CNTN2Q02246 1040 aa12.38□□□□□ -0.43
USP47-202ENST00000339865 KCTD20Q7Z5Y7 419 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms