RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 A6NNC1 897 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 HCN1O60741 890 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 TTC4O95801 387 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 P04436 131 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 CCL3P10147 92 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 GABRA1P14867 456 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 GSTM2P28161 218 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 UQCRC1P31930 480 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 DGKQP52824 942 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 ADAM8P78325 824 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 FLYWCH1Q4VC44 716 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 SPANXN3Q5MJ09 141 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 FAM45BPQ6NSW5 357 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 OPN5Q6U736 354 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 CAMKMTQ7Z624 323 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 CDC20BQ86Y33 519 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 PPIL6Q8IXY8 311 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 SPC24Q8NBT2 197 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 TRIM58Q8NG06 486 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 OR8K3Q8NH51 312 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 FAM45AQ8TCE6 357 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 PTPMT1Q8WUK0 201 aaPredicted RBP10.63□□□□□ -0.71
CSMD2-202ENST00000338325 MBD6Q96DN6 1003 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 PDLIM5Q96HC4 596 aaKnown RBP10.63□□□□□ -0.71
CSMD2-202ENST00000338325 SGCZQ96LD1 299 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 CSF3RQ99062 836 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 EXO5Q9H790 373 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 LZTFL1Q9NQ48 299 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 ALKBH4Q9NXW9 302 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 SLC17A6Q9P2U8 582 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 SPRR3Q9UBC9 169 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 CORO1CQ9ULV4 474 aaPredicted RBP10.63□□□□□ -0.71
CSMD2-202ENST00000338325 ATG4BQ9Y4P1 393 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 VPS13CQ709C8 3753 aa10.63□□□□□ -0.71
CSMD2-202ENST00000338325 TRGV5A0A0B4J1U4 118 aa10.62□□□□□ -0.71
CSMD2-202ENST00000338325 SYT5O00445 386 aa10.62□□□□□ -0.71
CSMD2-202ENST00000338325 CYR61O00622 381 aa10.62□□□□□ -0.71
CSMD2-202ENST00000338325 H2AFYO75367 372 aaKnown RBP10.62□□□□□ -0.71
CSMD2-202ENST00000338325 C1GALT1C1LP0DN25 315 aa10.62□□□□□ -0.71
CSMD2-202ENST00000338325 ENDOUP21128 410 aaKnown RBP10.62□□□□□ -0.71
CSMD2-202ENST00000338325 CDC25BP30305 580 aa10.62□□□□□ -0.71
CSMD2-202ENST00000338325 HPDP32754 393 aaPredicted RBP10.62□□□□□ -0.71
CSMD2-202ENST00000338325 LIM2P55344 173 aa10.62□□□□□ -0.71
CSMD2-202ENST00000338325 RNF4P78317 190 aa10.62□□□□□ -0.71
CSMD2-202ENST00000338325 RCN2Q14257 317 aa10.62□□□□□ -0.71
CSMD2-202ENST00000338325 SLBPQ14493 270 aaKnown RBP eCLIP10.62□□□□□ -0.71
CSMD2-202ENST00000338325 TRIM40Q6P9F5 258 aa10.62□□□□□ -0.71
CSMD2-202ENST00000338325 CCDC137Q6PK04 289 aaKnown RBP10.62□□□□□ -0.71
CSMD2-202ENST00000338325 PAMR1Q6UXH9 720 aa10.62□□□□□ -0.71
CSMD2-202ENST00000338325 TMIGD1Q6UXZ0 262 aa10.62□□□□□ -0.71
CSMD2-202ENST00000338325 ZNF321PQ8N8H1 164 aa10.62□□□□□ -0.71
CSMD2-202ENST00000338325 OR2L5Q8NG80 312 aa10.62□□□□□ -0.71
CSMD2-202ENST00000338325 OR5L2Q8NGL0 311 aa10.62□□□□□ -0.71
CSMD2-202ENST00000338325 SLC2A12Q8TD20 617 aa10.62□□□□□ -0.71
CSMD2-202ENST00000338325 LRRC46Q96FV0 321 aa10.62□□□□□ -0.71
CSMD2-202ENST00000338325 CERS2Q96G23 380 aa10.62□□□□□ -0.71
CSMD2-202ENST00000338325 SERINC2Q96SA4 455 aa10.62□□□□□ -0.71
CSMD2-202ENST00000338325 EGFL8Q99944 293 aa10.62□□□□□ -0.71
CSMD2-202ENST00000338325 CNPPD1Q9BV87 410 aa10.62□□□□□ -0.71
CSMD2-202ENST00000338325 ALOXE3Q9BYJ1 711 aa10.62□□□□□ -0.71
CSMD2-202ENST00000338325 OR8D2Q9GZM6 311 aa10.62□□□□□ -0.71
CSMD2-202ENST00000338325 SEMA4BQ9NPR2 832 aaPredicted RBP10.62□□□□□ -0.71
CSMD2-202ENST00000338325 DMRT3Q9NQL9 472 aa10.62□□□□□ -0.71
CSMD2-202ENST00000338325 VTI1BQ9UEU0 232 aa10.62□□□□□ -0.71
CSMD2-202ENST00000338325 DAPP1Q9UN19 280 aa10.62□□□□□ -0.71
CSMD2-202ENST00000338325 VWA7Q9Y334 891 aa10.62□□□□□ -0.71
CSMD2-202ENST00000338325 MYOCOSA0A1B0GUC4 107 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 NPEPPSL1A6NEC2 478 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 HSPB2A8KAH6 182 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 C17orf105B2RV13 164 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 ZNF354AO60765 605 aaPredicted RBP10.61□□□□□ -0.71
CSMD2-202ENST00000338325 CTNSO60931 367 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 BANF1O75531 89 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 CLEC3AO75596 197 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 WDR47O94967 919 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 GNAZP19086 355 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 CERS1P27544 350 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 HNMTP50135 292 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 ASCL1P50553 236 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 PLA2G16P53816 162 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 MTTPP55157 894 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 CDKL1Q00532 357 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 STX4Q12846 297 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 EFTUD2Q15029 972 aaKnown RBP eCLIP10.61□□□□□ -0.71
CSMD2-202ENST00000338325 HSPB2Q16082 182 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 ADPRMQ3LIE5 342 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 SLCO4C1Q6ZQN7 724 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 ZNF662Q6ZS27 426 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 BIVMQ86UB2 503 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 KRT78Q8N1N4 520 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 FBXW8Q8N3Y1 598 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 RELL2Q8NC24 303 aaPredicted RBP10.61□□□□□ -0.71
CSMD2-202ENST00000338325 FAM222BQ8WU58 562 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 SH3GL2Q99962 352 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 REXO4Q9GZR2 422 aaKnown RBP10.61□□□□□ -0.71
CSMD2-202ENST00000338325 ZNF703Q9H7S9 590 aaPredicted RBP10.61□□□□□ -0.71
CSMD2-202ENST00000338325 COPS7BQ9H9Q2 264 aaPredicted RBP10.61□□□□□ -0.71
CSMD2-202ENST00000338325 COPS7AQ9UBW8 275 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 CBLCQ9ULV8 474 aa10.61□□□□□ -0.71
CSMD2-202ENST00000338325 OARD1Q9Y530 152 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms