RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 THAP10Q9P2Z0 257 aaPredicted RBP8.43□□□□□ -1.06
SNCA-201ENST00000336904 ZNF282Q9UDV7 671 aaPredicted RBP8.43□□□□□ -1.06
SNCA-201ENST00000336904 RNF6Q9Y252 685 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 PCDHGA10Q9Y5H3 936 aa8.43□□□□□ -1.06
SNCA-201ENST00000336904 ARHGEF17Q96PE2 2063 aaPredicted RBP8.42□□□□□ -1.06
SNCA-201ENST00000336904 M0R3H8 397 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 PGRMC2O15173 223 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 SEC14L2O76054 403 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 APOL3O95236 402 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 CPNE6O95741 557 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 BCL10O95999 233 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 SEMG1P04279 462 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 OR12D1P0DN82 309 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 PCMT1P22061 227 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 KELP23276 732 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 GPC1P35052 558 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 BMXP51813 675 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 SELENOWP63302 87 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 SRSF5Q13243 272 aaKnown RBP8.42□□□□□ -1.06
SNCA-201ENST00000336904 C18orf63Q68DL7 685 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 SYCE2Q6PIF2 218 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 CPA6Q8N4T0 437 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 OR4D11Q8NGI4 311 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 MIPOL1Q8TD10 442 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 SLC38A5Q8WUX1 472 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 TM4SF18Q96CE8 201 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 REPS1Q96D71 796 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 PDXPQ96GD0 296 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 RERGLQ9H628 205 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 C6orf106Q9H6K1 298 aaPredicted RBP8.42□□□□□ -1.06
SNCA-201ENST00000336904 FGF22Q9HCT0 170 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 GALNT8Q9NY28 637 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 NFKBIL1Q9UBC1 381 aaPredicted RBP8.42□□□□□ -1.06
SNCA-201ENST00000336904 BTNL2Q9UIR0 455 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 TRBV4-1A0A0J9YWV2 114 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 ZNF860A6NHJ4 632 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 HAT1O14929 419 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 NDUFS4O43181 175 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 ERI3O43414 337 aaKnown RBP8.42□□□□□ -1.06
SNCA-201ENST00000336904 PFDN1O60925 122 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 DNAJB6O75190 326 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 NDUFS2O75306 463 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 SEMA7AO75326 666 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 ADRA2AP08913 450 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 PCGF2P35227 344 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 BSGP35613 385 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 LIM2P55344 173 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 DSTNP60981 165 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 OLR1P78380 273 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 ID2Q02363 134 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 SGCGQ13326 291 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 MADCAM1Q13477 382 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 MAD2L1BPQ15013 274 aaPredicted RBP8.42□□□□□ -1.06
SNCA-201ENST00000336904 DUSP6Q16828 381 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 RBM48Q5RL73 367 aaKnown RBP8.42□□□□□ -1.06
SNCA-201ENST00000336904 KIAA1614Q5VZ46 1190 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 UBE3DQ7Z6J8 389 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 OR4N5Q8IXE1 308 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 CCDC116Q8IYX3 515 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 CHCHD4Q8N4Q1 142 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 GIPC3Q8TF64 312 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 COL26A1Q96A83 441 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 TMEM19Q96HH6 336 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 COX14Q96I36 57 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 MENTQ9BUN1 341 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 TRIT1Q9H3H1 467 aaKnown RBP8.42□□□□□ -1.06
SNCA-201ENST00000336904 SERHL2Q9H4I8 314 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 SFXN1Q9H9B4 322 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 PCDHGA6Q9Y5G7 932 aa8.42□□□□□ -1.06
SNCA-201ENST00000336904 ATG2AQ2TAZ0 1938 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 SYNDIG1LA6NDD5 238 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 ANHXE9PGG2 379 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 BTN3A3O00478 584 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 PRMT3O60678 531 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 RECKO95980 971 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 CERS1P27544 350 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 GSTM2P28161 218 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 IGFALSP35858 605 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 BCL6P41182 706 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 UBE3AQ05086 875 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 DPTQ07507 201 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 DOC2BQ14184 412 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 PUM1Q14671 1186 aaKnown RBP eCLIP8.41□□□□□ -1.06
SNCA-201ENST00000336904 TMEM52BQ4KMG9 183 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 IFI44LQ53G44 452 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 PERM1Q5SV97 790 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 DEPDC1Q5TB30 811 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 METRNLQ641Q3 311 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 ERICH5Q6P6B1 374 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 DSG4Q86SJ6 1040 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 KRT78Q8N1N4 520 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 IQCF1Q8N6M8 205 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 AQP11Q8NBQ7 271 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 OR52N2Q8NGI0 321 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 OR52E1Q8NGJ3 308 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 ZCCHC10Q8TBK6 192 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 ADAMTS16Q8TE57 1224 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 RORBQ92753 470 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 COL21A1Q96P44 957 aa8.41□□□□□ -1.06
SNCA-201ENST00000336904 DPH7Q9BTV6 452 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms