RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 LMLNQ96KR4 655 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 EBF4Q9BQW3 602 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 B3GNT5Q9BYG0 378 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 NKX6-2Q9C056 277 aaPredicted RBP9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 SEC61A2Q9H9S3 476 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 CTPS2Q9NRF8 586 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 TMEM100Q9NV29 134 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 MARCH2Q9P0N8 246 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 ABCC6O95255 1503 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 SULT1C4O75897 302 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 MINDY4Q4G0A6 757 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 ABLIM2Q6H8Q1 611 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 SLC39A4Q6P5W5 647 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 CLEC10AQ8IUN9 316 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 GLYATL2Q8WU03 294 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 NSUN4Q96CB9 384 aaKnown RBP9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 LUZP4Q9P127 313 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 CLCA3PQ9Y6N3 262 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 TBL1XO60907 577 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 APOA2P02652 100 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 LPOP22079 712 aaPredicted RBP9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 ZNF157P51786 506 aaPredicted RBP9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 CDK3Q00526 305 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 MEP1AQ16819 746 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 CRB2Q5IJ48 1285 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 MLIPQ5VWP3 458 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 MBLAC2Q68D91 279 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 RHOUQ7L0Q8 258 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 NIPA2Q8N8Q9 360 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 TRAPPC12Q8WVT3 735 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 SLC19A3Q9BZV2 496 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 TAS2R14Q9NYV8 317 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 PCDHGA5Q9Y5G8 931 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 ARPC5O15511 151 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 MSI1O43347 362 aaKnown RBP9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 TLR5O60602 858 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 RBBP9O75884 186 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 PITPNBP48739 271 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 BAMBIQ13145 260 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 CAPN13Q6MZZ7 669 aaPredicted RBP9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 RAVER1Q8IY67 606 aaKnown RBP9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 GPR135Q8IZ08 494 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 ZSCAN4Q8NAM6 433 aaPredicted RBP9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 TFAP2CQ92754 450 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 TMEM41AQ96HV5 264 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 OCSTAMPQ9BR26 566 aa9.99□□□□□ -0.81
SPTBN1-201ENST00000333896 DLX5P56178 289 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 VSX2P58304 361 aaPredicted RBP9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 ZDHHC20Q5W0Z9 365 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 ZNF705AQ6ZN79 300 aaPredicted RBP9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 AGBL3Q8NEM8 1001 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 OR56B4Q8NH76 319 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 ELOVL4Q9GZR5 314 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 ADAM18Q9Y3Q7 739 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 TUBGCP6Q96RT7 1819 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 MON2Q7Z3U7 1717 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 C19orf81C9J6K1 198 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 BRINP1O60477 761 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 PTBP1P26599 531 aaKnown RBP eCLIP9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 UGT3A2Q3SY77 523 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 TMEM41BQ5BJD5 291 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 DEFB106AQ8N104 65 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 SUMF2Q8NBJ7 301 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 HCAR2Q8TDS4 363 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 LRRC46Q96FV0 321 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 BSCL2Q96G97 398 aaPredicted RBP9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 SMOXQ9NWM0 555 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 GTF2IRD1Q9UHL9 959 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 E5RJQ4 531 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 TYROBPO43914 113 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 PRKCGP05129 697 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 SERPINA7P05543 415 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 ZNF484Q5JVG2 852 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 KCTD20Q7Z5Y7 419 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 ZSWIM9Q86XI8 627 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 PYROXD2Q8N2H3 581 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 MTURNQ8N3F0 131 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 GTF3C2Q8WUA4 911 aaPredicted RBP9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 PRDM12Q9H4Q4 367 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 RANGRFQ9HD47 186 aaPredicted RBP9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 DNAJC5BQ9UF47 199 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 TRAV19A0A0A6YYK7 116 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 IQCF5A8MTL0 148 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 SMIM6P0DI80 62 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 RPS19P39019 145 aaKnown RBP9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 LCN8Q6JVE9 175 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 SMPDL3AQ92484 453 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 MOAP1Q96BY2 351 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 CARS2Q9HA77 564 aaKnown RBP9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 TEX10Q9NXF1 929 aaPredicted RBP9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 C4AP0C0L4 1744 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 C4BP0C0L5 1744 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 hCG_1807616A0A1W2PRN6 198 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 CBY3A6NI87 242 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 KLRC4O43908 158 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 ATG13O75143 517 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 CHRNA4P43681 627 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 CDH8P55286 799 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 ZMAT1Q5H9K5 638 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 C4orf19Q8IY42 314 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms