RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 FEN1P39748 380 aaKnown RBP12.8□□□□□ -0.36
TUBA1B-201ENST00000332858 MLIPQ5VWP3 458 aa12.8□□□□□ -0.36
TUBA1B-201ENST00000332858 WASH2PQ6VEQ5 465 aa12.8□□□□□ -0.36
TUBA1B-201ENST00000332858 CCDC80Q76M96 950 aa12.8□□□□□ -0.36
TUBA1B-201ENST00000332858 RBM45Q8IUH3 476 aaKnown RBP12.8□□□□□ -0.36
TUBA1B-201ENST00000332858 OXR1Q8N573 874 aa12.8□□□□□ -0.36
TUBA1B-201ENST00000332858 HORMAD2Q8N7B1 307 aa12.8□□□□□ -0.36
TUBA1B-201ENST00000332858 FBXO15Q8NCQ5 510 aaPredicted RBP12.8□□□□□ -0.36
TUBA1B-201ENST00000332858 NUS1Q96E22 293 aa12.8□□□□□ -0.36
TUBA1B-201ENST00000332858 F2RL3Q96RI0 385 aa12.8□□□□□ -0.36
TUBA1B-201ENST00000332858 ZNF717Q9BY31 904 aaPredicted RBP12.8□□□□□ -0.36
TUBA1B-201ENST00000332858 CUEDC1Q9NWM3 386 aaPredicted RBP12.8□□□□□ -0.36
TUBA1B-201ENST00000332858 TRBV4-1A0A0J9YWV2 114 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 PLPP1O14494 284 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 GADD45GO95257 159 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 ARAFP10398 606 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 NAT1P18440 290 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 PSMB5P28074 263 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 SEPHS1P49903 392 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 ZNF404Q494X3 552 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 BCL7AQ4VC05 210 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 ARHGAP15Q53QZ3 475 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 ARMCX4Q5H9R4 360 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 HIST2H2AA3Q6FI13 130 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 CEACAM20Q6UY09 585 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 PLEKHG7Q6ZR37 379 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 LINC00299Q6ZSB3 139 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 OLIG3Q7RTU3 272 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 NRSN1Q8IZ57 195 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 CLIP4Q8N3C7 705 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 STX19Q8N4C7 294 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 ANKRD53Q8N9V6 530 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 MYDGFQ969H8 173 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 Q96MT0 163 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 CHCHD6Q9BRQ6 235 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 CDADC1Q9BWV3 514 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 MIEF1Q9NQG6 463 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 MARK1Q9P0L2 795 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 CXXC1Q9P0U4 656 aaPredicted RBP12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 DUSP12Q9UNI6 340 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 HCN4Q9Y3Q4 1203 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 KIAA1549LQ6ZVL6 1849 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 FEZF1A0PJY2 475 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 METTL15A6NJ78 407 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 CBLP22681 906 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 CHMP24386 653 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 EIF2DP41214 584 aaKnown RBP12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 ALDH9A1P49189 494 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 PRMT2P55345 433 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 RPS3AP61247 264 aaKnown RBP12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 CSNK2BP67870 215 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 RBBP4Q09028 425 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 C10orf62Q5T681 223 aaPredicted RBP12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 FAM129CQ86XR2 697 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 SLC38A5Q8WUX1 472 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 GEMIN6Q8WXD5 167 aaKnown RBP12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 IL4I1Q96RQ9 567 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 IRF2BPLQ9H1B7 796 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 EPHX3Q9H6B9 360 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 NMNAT1Q9HAN9 279 aaPredicted RBP12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 IMPAD1Q9NX62 359 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 SCHIP1Q9P0W5 487 aaPredicted RBP12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 CAB39Q9Y376 341 aaPredicted RBP12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 CNR2P34972 360 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 PTGER1P34995 402 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 HMGA2P52926 109 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 PPP5CP53041 499 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 CNTN1Q12860 1018 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 SEC23BQ15437 767 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 CARTPTQ16568 116 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 UAP1L1Q3KQV9 507 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 C9orf64Q5T6V5 341 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 SLC9B2Q86UD5 537 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 KIAA1958Q8N8K9 716 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 FAM83FQ8NEG4 500 aaPredicted RBP12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 LRIG1Q96JA1 1093 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 DACH2Q96NX9 599 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 MAPRE3Q9UPY8 281 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 ENPP4Q9Y6X5 453 aa12.79□□□□□ -0.36
TUBA1B-201ENST00000332858 PPM1DO15297 605 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 TBX1O43435 398 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 LZTS3O60299 673 aaPredicted RBP12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 SOX14O95416 240 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 TIMP1P01033 207 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 BCHEP06276 602 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 RGS6P49758 472 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 DSTNP60981 165 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 ZNF630Q2M218 657 aaPredicted RBP12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 PRAMEF14Q5SWL7 426 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 PRAMEF13Q5VWM6 474 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 ZNF770Q6IQ21 691 aaPredicted RBP12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 HMGN2P46Q86SG4 172 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 LSRQ86X29 649 aaPredicted RBP12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 CACUL1Q86Y37 369 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 AMER3Q8N944 861 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 GPR32P1Q8NGA4 272 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 OR52A5Q9H2C5 316 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 TAC3Q9UHF0 121 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 IFT52Q9Y366 437 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 A0A0G2JN53 185 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms