RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 SH2D4BQ5SQS7 431 aa14.94□□□□□ -0.02
CCDC28A-201ENST00000332797 NDUFAF7Q7L592 441 aa14.94□□□□□ -0.02
CCDC28A-201ENST00000332797 COMMD6Q7Z4G1 85 aa14.94□□□□□ -0.02
CCDC28A-201ENST00000332797 CPEB2Q7Z5Q1 589 aaKnown RBP14.94□□□□□ -0.02
CCDC28A-201ENST00000332797 CLNKQ7Z7G1 428 aa14.94□□□□□ -0.02
CCDC28A-201ENST00000332797 GPR180Q86V85 440 aa14.94□□□□□ -0.02
CCDC28A-201ENST00000332797 ZNF595Q8IYB9 648 aa14.94□□□□□ -0.02
CCDC28A-201ENST00000332797 C1orf52Q8N6N3 182 aaKnown RBP14.94□□□□□ -0.02
CCDC28A-201ENST00000332797 EXD3Q8N9H8 876 aa14.94□□□□□ -0.02
CCDC28A-201ENST00000332797 OR6Y1Q8NGX8 325 aa14.94□□□□□ -0.02
CCDC28A-201ENST00000332797 SH3GL2Q99962 352 aa14.94□□□□□ -0.02
CCDC28A-201ENST00000332797 NECTIN3Q9NQS3 549 aa14.94□□□□□ -0.02
CCDC28A-201ENST00000332797 MMACHCQ9Y4U1 282 aa14.94□□□□□ -0.02
CCDC28A-201ENST00000332797 ZFYVE26Q68DK2 2539 aa14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 SCN2AQ99250 2005 aa14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 A0A1W2PQ72 361 aa14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 TMEM233B4DJY2 109 aa14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 ATXN7O15265 892 aaPredicted RBP14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 LYPLA1O75608 230 aaPredicted RBP14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 SEC24DO94855 1032 aaPredicted RBP14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 CHEK2O96017 543 aa14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 TPP2P29144 1249 aaPredicted RBP14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 HSD17B7P56937 341 aa14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 WDR4P57081 412 aaKnown RBP14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 TNFRSF17Q02223 184 aa14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 BTKQ06187 659 aa14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 GALNT1Q10472 559 aaPredicted RBP14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 AIMP2Q13155 320 aaKnown RBP14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 RAPSNQ13702 412 aa14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 PCOLCEQ15113 449 aa14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 SFT2D3Q587I9 215 aa14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 CCNYL2Q5T2Q4 361 aa14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 CES4AQ5XG92 561 aa14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 KANK2Q63ZY3 851 aa14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 MRM1Q6IN84 353 aaKnown RBP14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 SCUBE1Q8IWY4 988 aa14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 PARP9Q8IXQ6 854 aa14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 ZNF700Q9H0M5 742 aa14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 ATP13A2Q9NQ11 1180 aa14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 RIC8BQ9NVN3 520 aa14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 MS4A12Q9NXJ0 267 aa14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 ADAM29Q9UKF5 820 aa14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 ATG4BQ9Y4P1 393 aa14.93□□□□□ -0.02
CCDC28A-201ENST00000332797 CHD6Q8TD26 2715 aa14.92□□□□□ -0.02
CCDC28A-201ENST00000332797 IGKV3D-11A0A0A0MRZ8 115 aa14.92□□□□□ -0.02
CCDC28A-201ENST00000332797 SERTM1A2A2V5 107 aa14.92□□□□□ -0.02
CCDC28A-201ENST00000332797 TMEM114B3SHH9 223 aa14.92□□□□□ -0.02
CCDC28A-201ENST00000332797 MKRN2OSH3BPM6 223 aa14.92□□□□□ -0.02
CCDC28A-201ENST00000332797 PRKRAO75569 313 aaKnown RBP14.92□□□□□ -0.02
CCDC28A-201ENST00000332797 HSPA4LO95757 839 aa14.92□□□□□ -0.02
CCDC28A-201ENST00000332797 ITGA3P26006 1051 aa14.92□□□□□ -0.02
CCDC28A-201ENST00000332797 TLX1P31314 330 aaPredicted RBP14.92□□□□□ -0.02
CCDC28A-201ENST00000332797 BUD31P41223 144 aaPredicted RBP14.92□□□□□ -0.02
CCDC28A-201ENST00000332797 SLC18A1P54219 525 aa14.92□□□□□ -0.02
CCDC28A-201ENST00000332797 OR4D2P58180 307 aa14.92□□□□□ -0.02
CCDC28A-201ENST00000332797 ACTN3Q08043 901 aaPredicted RBP14.92□□□□□ -0.02
CCDC28A-201ENST00000332797 SPDYAQ5MJ70 313 aa14.92□□□□□ -0.02
CCDC28A-201ENST00000332797 C18orf63Q68DL7 685 aa14.92□□□□□ -0.02
CCDC28A-201ENST00000332797 ATG14Q6ZNE5 492 aa14.92□□□□□ -0.02
CCDC28A-201ENST00000332797 GALNT16Q8N428 558 aa14.92□□□□□ -0.02
CCDC28A-201ENST00000332797 CHTF18Q8WVB6 975 aa14.92□□□□□ -0.02
CCDC28A-201ENST00000332797 WBP1Q96G27 269 aa14.92□□□□□ -0.02
CCDC28A-201ENST00000332797 TUBB6Q9BUF5 446 aa14.92□□□□□ -0.02
CCDC28A-201ENST00000332797 ADNPQ9H2P0 1102 aa14.92□□□□□ -0.02
CCDC28A-201ENST00000332797 TRAF6Q9Y4K3 522 aa14.92□□□□□ -0.02
CCDC28A-201ENST00000332797 ASB4Q9Y574 426 aa14.92□□□□□ -0.02
CCDC28A-201ENST00000332797 PTGDR2Q9Y5Y4 395 aa14.92□□□□□ -0.02
CCDC28A-201ENST00000332797 TCRBV16S1A1N1A0A5B0 115 aa14.91□□□□□ -0.02
CCDC28A-201ENST00000332797 BLACEA4D250 179 aa14.91□□□□□ -0.02
CCDC28A-201ENST00000332797 TGFBR3LH3BV60 316 aa14.91□□□□□ -0.02
CCDC28A-201ENST00000332797 PROM1O43490 865 aa14.91□□□□□ -0.02
CCDC28A-201ENST00000332797 ITM2AO43736 263 aa14.91□□□□□ -0.02
CCDC28A-201ENST00000332797 NR2F6P10588 404 aa14.91□□□□□ -0.02
CCDC28A-201ENST00000332797 GRK2P25098 689 aa14.91□□□□□ -0.02
CCDC28A-201ENST00000332797 MAPK12P53778 367 aa14.91□□□□□ -0.02
CCDC28A-201ENST00000332797 ABCE1P61221 599 aaKnown RBP14.91□□□□□ -0.02
CCDC28A-201ENST00000332797 ACSM2AQ08AH3 577 aa14.91□□□□□ -0.02
CCDC28A-201ENST00000332797 Q0VFX4 171 aa14.91□□□□□ -0.02
CCDC28A-201ENST00000332797 SPIN4Q56A73 249 aa14.91□□□□□ -0.02
CCDC28A-201ENST00000332797 ACSM2BQ68CK6 577 aa14.91□□□□□ -0.02
CCDC28A-201ENST00000332797 PAPD4Q6PIY7 484 aaKnown RBP14.91□□□□□ -0.02
CCDC28A-201ENST00000332797 TRIM46Q7Z4K8 759 aa14.91□□□□□ -0.02
CCDC28A-201ENST00000332797 CLYBLQ8N0X4 340 aa14.91□□□□□ -0.02
CCDC28A-201ENST00000332797 ABHD17AQ96GS6 310 aa14.91□□□□□ -0.02
CCDC28A-201ENST00000332797 APIPQ96GX9 242 aa14.91□□□□□ -0.02
CCDC28A-201ENST00000332797 BBC3Q96PG8 261 aaPredicted RBP14.91□□□□□ -0.02
CCDC28A-201ENST00000332797 SLC25A23Q9BV35 468 aa14.91□□□□□ -0.02
CCDC28A-201ENST00000332797 ACBD3Q9H3P7 528 aa14.91□□□□□ -0.02
CCDC28A-201ENST00000332797 RPF2Q9H7B2 306 aaKnown RBP14.91□□□□□ -0.02
CCDC28A-201ENST00000332797 TEX10Q9NXF1 929 aaPredicted RBP14.91□□□□□ -0.02
CCDC28A-201ENST00000332797 ZDHHC2Q9UIJ5 367 aa14.91□□□□□ -0.02
CCDC28A-201ENST00000332797 DNAJC15Q9Y5T4 150 aa14.91□□□□□ -0.02
CCDC28A-201ENST00000332797 PIEZO2Q9H5I5 2752 aa14.91□□□□□ -0.02
CCDC28A-201ENST00000332797 MYOCOSA0A1B0GUC4 107 aa14.9□□□□□ -0.02
CCDC28A-201ENST00000332797 A0A1W2PR48 441 aa14.9□□□□□ -0.02
CCDC28A-201ENST00000332797 A8MUA0 341 aa14.9□□□□□ -0.02
CCDC28A-201ENST00000332797 HMGB1P1B2RPK0 211 aaPredicted RBP14.9□□□□□ -0.02
CCDC28A-201ENST00000332797 CTNSO60931 367 aa14.9□□□□□ -0.02
CCDC28A-201ENST00000332797 LDB3O75112 727 aa14.9□□□□□ -0.02
CCDC28A-201ENST00000332797 AIFM1O95831 613 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms