RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 MANFP55145 182 aaKnown RBP16.56■□□□□ 0.24
DDX28-201ENST00000332395 ZNF829Q3KNS6 432 aaPredicted RBP16.56■□□□□ 0.24
DDX28-201ENST00000332395 NATD1Q8N6N6 113 aa16.56■□□□□ 0.24
DDX28-201ENST00000332395 ZNF300Q96RE9 604 aaPredicted RBP16.56■□□□□ 0.24
DDX28-201ENST00000332395 CCDC90BQ9GZT6 254 aa16.56■□□□□ 0.24
DDX28-201ENST00000332395 FZD3Q9NPG1 666 aa16.56■□□□□ 0.24
DDX28-201ENST00000332395 THSD1Q9NS62 852 aa16.56■□□□□ 0.24
DDX28-201ENST00000332395 TMEM184CQ9NVA4 438 aa16.56■□□□□ 0.24
DDX28-201ENST00000332395 C5AR2Q9P296 337 aa16.56■□□□□ 0.24
DDX28-201ENST00000332395 HEATR5BQ9P2D3 2071 aa16.56■□□□□ 0.24
DDX28-201ENST00000332395 SZT2Q5T011 3432 aa16.56■□□□□ 0.24
DDX28-201ENST00000332395 OR52A4PA6NMU1 304 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 RNGTTO60942 597 aaKnown RBP16.55■□□□□ 0.24
DDX28-201ENST00000332395 PCMT1P22061 227 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 PKLRP30613 574 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 MAT2AP31153 395 aaKnown RBP16.55■□□□□ 0.24
DDX28-201ENST00000332395 MAPK10P53779 464 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 CXCR4P61073 352 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 TMEM196Q5HYL7 178 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 FGD3Q5JSP0 725 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 SAXO2Q658L1 398 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 LAIR1Q6GTX8 287 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 CEACAM20Q6UY09 585 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 UBE3DQ7Z6J8 389 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 MUL1Q969V5 352 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 FAM131CQ96AQ9 280 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 NEURL3Q96EH8 262 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 PITX2Q99697 317 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 DGCR6LQ9BY27 220 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 NEUROD4Q9HD90 331 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.55■□□□□ 0.24
DDX28-201ENST00000332395 ZNF451Q9Y4E5 1061 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 GPSM3Q9Y4H4 160 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 PRR19A6NJB7 356 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 DNTTP04053 509 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 SERPIND1P05546 499 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 JUNDP17535 347 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 ITIH1P19827 911 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 NTSR1P30989 418 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 ADPRHP54922 357 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 SPIBQ01892 262 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 RELAQ04206 551 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 KRT33BQ14525 404 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 MAD2L1BPQ15013 274 aaPredicted RBP16.55■□□□□ 0.24
DDX28-201ENST00000332395 CYP27C1Q4G0S4 372 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 CCDC71Q8IV32 467 aaPredicted RBP16.55■□□□□ 0.24
DDX28-201ENST00000332395 SLC30A8Q8IWU4 369 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 OR2L8Q8NGY9 312 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 GEMIN6Q8WXD5 167 aaKnown RBP16.55■□□□□ 0.24
DDX28-201ENST00000332395 THAP11Q96EK4 314 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 RAB11FIP5Q9BXF6 653 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 GABARAPL3Q9BY60 117 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 INIPQ9NRY2 104 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 TEX10Q9NXF1 929 aaPredicted RBP16.55■□□□□ 0.24
DDX28-201ENST00000332395 ADAM29Q9UKF5 820 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 RAB23Q9ULC3 237 aa16.55■□□□□ 0.24
DDX28-201ENST00000332395 PDZK1P1A8MUH7 402 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 E9PQ18 207 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 CLEC3AO75596 197 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 TFPTP0C1Z6 253 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 ZNF12P17014 697 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 ITGA2P17301 1181 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 DDX5P17844 614 aaKnown RBP16.54■□□□□ 0.24
DDX28-201ENST00000332395 CCNA2P20248 432 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 FRKP42685 505 aaPredicted RBP16.54■□□□□ 0.24
DDX28-201ENST00000332395 GSTM5P46439 218 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 CDH12P55289 794 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 PCBP4P57723 403 aaKnown RBP16.54■□□□□ 0.24
DDX28-201ENST00000332395 RPS26P62854 115 aaKnown RBP16.54■□□□□ 0.24
DDX28-201ENST00000332395 RPP38P78345 283 aaKnown RBP16.54■□□□□ 0.24
DDX28-201ENST00000332395 HSPB3Q12988 150 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 OR52E1Q8NGJ3 308 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 OR4C15Q8NGM1 316 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 TBC1D15Q8TC07 691 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 CREB3L4Q8TEY5 395 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 RAB2BQ8WUD1 216 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 EXOSC8Q96B26 276 aaKnown RBP16.54■□□□□ 0.24
DDX28-201ENST00000332395 FEVQ99581 238 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 GABRG3Q99928 467 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 APOOQ9BUR5 198 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 C1QTNF7Q9BXJ2 289 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 DDX31Q9H8H2 851 aaKnown RBP16.54■□□□□ 0.24
DDX28-201ENST00000332395 TPRKBQ9Y3C4 175 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 TICRRQ7Z2Z1 1910 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 PRAMEF33A0A0G2JMD5 474 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 A0A0G2JN53 185 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 FOXD2O60548 495 aaPredicted RBP16.54■□□□□ 0.24
DDX28-201ENST00000332395 PRAMEF10O60809 474 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 INHBBP09529 407 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 SLC35A2P78381 396 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 OR4C11Q6IEV9 310 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 REEP3Q6NUK4 255 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 ARMC8Q8IUR7 673 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 FAM20CQ8IXL6 584 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 HORMAD2Q8N7B1 307 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 AMER3Q8N944 861 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 OR10G2Q8NGC3 310 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 OR52J3Q8NH60 311 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 PDXPQ96GD0 296 aa16.54■□□□□ 0.24
DDX28-201ENST00000332395 ZNF764Q96H86 408 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms