RNA–Protein interactions for RNA: ENST00000332296.7

PRAMEF1-201, Transcript of PRAME family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF1, Length 2,160 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-201ENST00000332296 STEAP3Q658P3 488 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 NLGN4XQ8N0W4 816 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 RASGEF1AQ8N9B8 481 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 UTP15Q8TED0 518 aaKnown RBP9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 FCGR1BQ92637 280 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 SLC35A5Q9BS91 424 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 CCM2Q9BSQ5 444 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 MIR1-1HGQ9H1L0 117 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 MTG2Q9H4K7 406 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 PLCXD1Q9NUJ7 323 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 ZNF282Q9UDV7 671 aaPredicted RBP9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 FOXD3Q9UJU5 478 aaPredicted RBP9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 LRRK1Q38SD2 2015 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 NINQ8N4C6 2090 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 AGAP5A6NIR3 686 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 NEDD8-MDP1E9PL57 170 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 RNASET2O00584 256 aaKnown RBP9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 KPNA5O15131 536 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 HSD3B1P14060 373 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 GTF2E2P29084 291 aaKnown RBP9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 VIPR1P32241 457 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 UGT2B10P36537 528 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 TMED10P49755 219 aaKnown RBP9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 DGKEP52429 567 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 SCARB2Q14108 478 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 ZNF77Q15935 545 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 IFI44LQ53G44 452 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 ANXA8L1Q5VT79 327 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 OR56A3Q8NH54 315 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 WDR48Q8TAF3 677 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 SORCS1Q8WY21 1168 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 STARD8Q92502 1023 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 MSLNLQ96KJ4 702 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 LRRC3BQ96PB8 259 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 CDX2Q99626 313 aaPredicted RBP9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 CENPOQ9BU64 300 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 RSRP1Q9BUV0 290 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 CDADC1Q9BWV3 514 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 KLHL25Q9H0H3 589 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 SPNS1Q9H2V7 528 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 EPS8L2Q9H6S3 715 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 QPCTLQ9NXS2 382 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 SPASTQ9UBP0 616 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 CORO2BQ9UQ03 480 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 CAB39Q9Y376 341 aaPredicted RBP9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 CFAP20Q9Y6A4 193 aaKnown RBP9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 DENND4AQ7Z401 1863 aa9.61□□□□□ -0.87
PRAMEF1-201ENST00000332296 PRAMEF33A0A0G2JMD5 474 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 FAM227AF5H4B4 570 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 PCDH17O14917 1159 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 PRAMEF10O60809 474 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 LEFTY1O75610 366 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 KLHL18O94889 574 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 KCNK2O95069 426 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 MAGP20916 626 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 PPIBP23284 216 aaKnown RBP9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 TPTEP56180 551 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 TBPL1P62380 186 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 MEF2AQ02078 507 aaPredicted RBP9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 ZNF763Q0D2J5 394 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 SELENBP1Q13228 472 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 TSTA3Q13630 321 aaPredicted RBP9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 GANABQ14697 944 aaKnown RBP9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 TEAD4Q15561 434 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 MICAQ29983 383 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 SPIN4Q56A73 249 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 GCNT6Q5T4J0 391 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 MLIPQ5VWP3 458 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 TMEM215Q68D42 235 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 FAM180BQ6P0A1 224 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 SLCO4C1Q6ZQN7 724 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 USP43Q70EL4 1123 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 ARMCX6Q7L4S7 300 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 COMMD6Q7Z4G1 85 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 ARMC8Q8IUR7 673 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 MMP21Q8N119 569 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 CELF5Q8N6W0 485 aaKnown RBP9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 VPS37AQ8NEZ2 397 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 SMARCD2Q92925 531 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 MYDGFQ969H8 173 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 SLC35B4Q969S0 331 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 GTPBP3Q969Y2 492 aaKnown RBP9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 TMEM159Q96B96 161 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 RSPRY1Q96DX4 576 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 RIPOR3Q96MK2 946 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 Q96MT0 163 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 LINC00597Q9H2U6 94 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 MMP27Q9H306 513 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 GDE1Q9NZC3 331 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 POFUT2Q9Y2G5 429 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 WDR37Q9Y2I8 494 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 PCDHGA3Q9Y5H0 932 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 SLC5A10A0PJK1 596 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 A8MU76 341 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 AP2A2O94973 939 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 CATP04040 527 aaKnown RBP9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 DNTTP04053 509 aa9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 RPLP0P05388 317 aaKnown RBP9.6□□□□□ -0.87
PRAMEF1-201ENST00000332296 CTSLP07711 333 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms