RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 ZNF888P0CJ79 500 aaPredicted RBP15.13■□□□□ 0.01
PDGFB-201ENST00000331163 ENGP17813 658 aa15.13■□□□□ 0.01
PDGFB-201ENST00000331163 RAB39AQ14964 217 aa15.13■□□□□ 0.01
PDGFB-201ENST00000331163 OR5T3Q8NGG3 340 aa15.13■□□□□ 0.01
PDGFB-201ENST00000331163 HPS1Q92902 700 aa15.13■□□□□ 0.01
PDGFB-201ENST00000331163 CMTM7Q96FZ5 175 aa15.13■□□□□ 0.01
PDGFB-201ENST00000331163 ADI1Q9BV57 179 aa15.13■□□□□ 0.01
PDGFB-201ENST00000331163 DMRT3Q9NQL9 472 aa15.13■□□□□ 0.01
PDGFB-201ENST00000331163 TEX10Q9NXF1 929 aaPredicted RBP15.13■□□□□ 0.01
PDGFB-201ENST00000331163 OAZ3Q9UMX2 235 aa15.13■□□□□ 0.01
PDGFB-201ENST00000331163 CORINQ9Y5Q5 1042 aa15.13■□□□□ 0.01
PDGFB-201ENST00000331163 H3BMQ9 156 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 GSTT2P0CG29 244 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 GSTT2BP0CG30 244 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 NCBP2P52298 156 aaKnown RBP eCLIP15.12■□□□□ 0.01
PDGFB-201ENST00000331163 ZC3H14Q6PJT7 736 aaKnown RBP15.12■□□□□ 0.01
PDGFB-201ENST00000331163 NELL1Q92832 810 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 RGMAQ96B86 450 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 COG8Q96MW5 612 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 CGREF1Q99674 301 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 SLC29A3Q9BZD2 475 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 DHCR7Q9UBM7 475 aaKnown RBP15.12■□□□□ 0.01
PDGFB-201ENST00000331163 WISP3O95389 354 aaPredicted RBP15.12■□□□□ 0.01
PDGFB-201ENST00000331163 BCL10O95999 233 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 UGT2B7P16662 529 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 BCL6P41182 706 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 SLC6A12P48065 614 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 RHDQ02161 417 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 RGS21Q2M5E4 152 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 ZBED5Q49AG3 693 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.12■□□□□ 0.01
PDGFB-201ENST00000331163 GRHL2Q6ISB3 625 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 HMBOX1Q6NT76 420 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 BLOC1S3Q6QNY0 202 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 OR2A1Q8NGT9 310 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 OR56A3Q8NH54 315 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 OR52J3Q8NH60 311 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 EDAQ92838 391 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 ASB9Q96DX5 294 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 DNAJA3Q96EY1 480 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 ITCHQ96J02 903 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 PHOX2BQ99453 314 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 SDR39U1Q9NRG7 319 aaPredicted RBP15.12■□□□□ 0.01
PDGFB-201ENST00000331163 ZCCHC3Q9NUD5 404 aaKnown RBP15.12■□□□□ 0.01
PDGFB-201ENST00000331163 EHD3Q9NZN3 535 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 ANKMY1Q9P2S6 941 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 FTSJ1Q9UET6 329 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 ADGRE2Q9UHX3 823 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 C2orf74A8MZ97 194 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 CLIC1O00299 241 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 EI24O14681 340 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 SERPINB7O75635 380 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 ST6GAL1P15907 406 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 NDUFS1P28331 727 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 CDKN2CP42773 168 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 GSK3BP49841 420 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 PIGFQ07326 219 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 NUDT13Q86X67 352 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 VANGL1Q8TAA9 524 aaPredicted RBP15.12■□□□□ 0.01
PDGFB-201ENST00000331163 EPS8L2Q9H6S3 715 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 SNX7Q9UNH6 387 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 PCDHGA7Q9Y5G6 932 aa15.12■□□□□ 0.01
PDGFB-201ENST00000331163 A0A1W2PPC1 479 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 GABRR3A8MPY1 467 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 hCG_2039718K7EN88 272 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 C1QCP02747 245 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 PSMA4P25789 261 aaKnown RBP15.11■□□□□ 0.01
PDGFB-201ENST00000331163 TIA1P31483 386 aaKnown RBP eCLIP15.11■□□□□ 0.01
PDGFB-201ENST00000331163 OR1D4P47884 311 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 ALDH3B2P48448 385 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 CLDN6P56747 220 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 TGM3Q08188 693 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 ZNF763Q0D2J5 394 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 STX4Q12846 297 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 C18orf63Q68DL7 685 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 CARM1Q86X55 608 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 ZFAND4Q86XD8 727 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 KIAA2013Q8IYS2 634 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 THAP3Q8WTV1 239 aaPredicted RBP15.11■□□□□ 0.01
PDGFB-201ENST00000331163 PEX11GQ96HA9 241 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 ZNF597Q96LX8 424 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 NLNQ9BYT8 704 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 RPF2Q9H7B2 306 aaKnown RBP15.11■□□□□ 0.01
PDGFB-201ENST00000331163 FAM86C1Q9NVL1 165 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 BTBD3Q9Y2F9 522 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 FAM227AF5H4B4 570 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 TNFRSF1BP20333 461 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 OR4D2P58180 307 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 YPEL5P62699 121 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 CSNK1G2P78368 415 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 SHC2P98077 582 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 DMPKQ09013 629 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 GPAT3Q53EU6 434 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 FRMPD2BQ6IN97 320 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 BORAQ6PGQ7 559 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 SLC15A3Q8IY34 581 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 ANKRD53Q8N9V6 530 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 TTC29Q8NA56 475 aaPredicted RBP15.11■□□□□ 0.01
PDGFB-201ENST00000331163 OR9A4Q8NGU2 314 aa15.11■□□□□ 0.01
PDGFB-201ENST00000331163 CTRCQ99895 268 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms