RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 NLE1Q9NVX2 485 aaPredicted RBP8.04□□□□□ -1.12
SKA2-201ENST00000330137 FAM120CQ9NX05 1096 aaKnown RBP8.04□□□□□ -1.12
SKA2-201ENST00000330137 COA4Q9NYJ1 87 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 CYB5R1Q9UHQ9 305 aa8.04□□□□□ -1.12
SKA2-201ENST00000330137 SCN1AP35498 2009 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 ANKRD12Q6UB98 2062 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 PIPSLA2A3N6 862 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 GATCO43716 136 aaKnown RBP8.03□□□□□ -1.12
SKA2-201ENST00000330137 PEX11BO96011 259 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 BCKDHAP12694 445 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 CCR1P32246 355 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 RPL9P32969 192 aaKnown RBP8.03□□□□□ -1.12
SKA2-201ENST00000330137 CRISP1P54107 249 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 IL18Q14116 193 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 LTB4RQ15722 352 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 PRAMEF18Q5VWM3 479 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 FRMPD2BQ6IN97 320 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 ALKAL1Q6UXT8 129 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 C3P1Q6ZMU1 363 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 VTCN1Q7Z7D3 282 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 LAPTM4BQ86VI4 370 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 LAS2Q8IYD9 372 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 BVESQ8NE79 360 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 ATG4CQ96DT6 458 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 GFM1Q96RP9 751 aaKnown RBP8.03□□□□□ -1.12
SKA2-201ENST00000330137 ULBP1Q9BZM6 244 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 DLL4Q9NR61 685 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 SLC6A13Q9NSD5 602 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 NDUFAF4Q9P032 175 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 ZNF222Q9UK12 451 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 POLR2AP24928 1970 aaKnown RBP8.03□□□□□ -1.12
SKA2-201ENST00000330137 LOC102723532A0A0G2JNH3 316 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 TMEM129A0AVI4 362 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 CARNS1A5YM72 827 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 SELENOFO60613 162 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 PRAF2O60831 178 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 MMP2P08253 660 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 HBQ1P09105 142 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 CLEC2LP0C7M8 214 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 PKMP14618 531 aaKnown RBP8.03□□□□□ -1.12
SKA2-201ENST00000330137 LCN1P31025 176 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 SLC6A4P31645 630 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 SOX3P41225 446 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 BDKRB1P46663 353 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 RFX3P48380 749 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 PLIN5Q00G26 463 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 FGL1Q08830 312 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 GPR176Q14439 515 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 NOMO2Q5JPE7 1267 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 CDKL4Q5MAI5 379 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 MSANTD2Q6P1R3 559 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 BHLHB9Q6PI77 547 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 FAM198BQ6UWH4 519 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 HFE2Q6ZVN8 426 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 ZNF551Q7Z340 670 aaPredicted RBP8.03□□□□□ -1.12
SKA2-201ENST00000330137 RNF180Q86T96 592 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 LDB1Q86U70 411 aaPredicted RBP8.03□□□□□ -1.12
SKA2-201ENST00000330137 PDZD3Q86UT5 571 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 LGI4Q8N135 537 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 UMODL1-AS1Q8N2C9 162 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 C10orf111Q8N326 155 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 SCARB1Q8WTV0 552 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 FOXJ1Q92949 421 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 GPR20Q99678 358 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 IPPKQ9H8X2 491 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 B3GAT2Q9NPZ5 323 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 ABCC13Q9NSE7 274 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 PURGQ9UJV8 347 aaKnown RBP8.03□□□□□ -1.12
SKA2-201ENST00000330137 HCN2Q9UL51 889 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 ZFR2Q9UPR6 939 aaKnown RBP8.03□□□□□ -1.12
SKA2-201ENST00000330137 PTCH2Q9Y6C5 1203 aa8.03□□□□□ -1.12
SKA2-201ENST00000330137 YJEFN3A6XGL0 299 aa8.02□□□□□ -1.13
SKA2-201ENST00000330137 NDUFS3O75489 264 aa8.02□□□□□ -1.13
SKA2-201ENST00000330137 PRPS1L1P21108 318 aa8.02□□□□□ -1.13
SKA2-201ENST00000330137 LMO2P25791 158 aa8.02□□□□□ -1.13
SKA2-201ENST00000330137 RBMS1P29558 406 aaKnown RBP8.02□□□□□ -1.13
SKA2-201ENST00000330137 TTPAP49638 278 aa8.02□□□□□ -1.13
SKA2-201ENST00000330137 TAF6P49848 677 aa8.02□□□□□ -1.13
SKA2-201ENST00000330137 RAB13P51153 203 aa8.02□□□□□ -1.13
SKA2-201ENST00000330137 SSTP61278 116 aa8.02□□□□□ -1.13
SKA2-201ENST00000330137 IL10RBQ08334 325 aa8.02□□□□□ -1.13
SKA2-201ENST00000330137 RBBP4Q09028 425 aa8.02□□□□□ -1.13
SKA2-201ENST00000330137 ILKQ13418 452 aa8.02□□□□□ -1.13
SKA2-201ENST00000330137 ZMYND11Q15326 602 aa8.02□□□□□ -1.13
SKA2-201ENST00000330137 ETFDHQ16134 617 aa8.02□□□□□ -1.13
SKA2-201ENST00000330137 IFI44LQ53G44 452 aa8.02□□□□□ -1.13
SKA2-201ENST00000330137 MARC1Q5VT66 337 aa8.02□□□□□ -1.13
SKA2-201ENST00000330137 SUSD1Q6UWL2 747 aa8.02□□□□□ -1.13
SKA2-201ENST00000330137 SEZ6L2Q6UXD5 910 aa8.02□□□□□ -1.13
SKA2-201ENST00000330137 OR8J2Q8NGG1 315 aa8.02□□□□□ -1.13
SKA2-201ENST00000330137 OR4D10Q8NGI6 311 aa8.02□□□□□ -1.13
SKA2-201ENST00000330137 OR8J1Q8NGP2 316 aa8.02□□□□□ -1.13
SKA2-201ENST00000330137 MYO19Q96H55 970 aa8.02□□□□□ -1.13
SKA2-201ENST00000330137 LCORQ96JN0 433 aaPredicted RBP8.02□□□□□ -1.13
SKA2-201ENST00000330137 FCRL1Q96LA6 429 aa8.02□□□□□ -1.13
SKA2-201ENST00000330137 ZIC5Q96T25 663 aa8.02□□□□□ -1.13
SKA2-201ENST00000330137 GPR21Q99679 349 aa8.02□□□□□ -1.13
SKA2-201ENST00000330137 ATF6BQ99941 703 aa8.02□□□□□ -1.13
SKA2-201ENST00000330137 CHST8Q9H2A9 424 aa8.02□□□□□ -1.13
SKA2-201ENST00000330137 ATXN3LQ9H3M9 355 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms