RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 C19orf48Q6RUI8 117 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 ALKAL2Q6UX46 152 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 SSX9Q7RTT3 188 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 HSD17B13Q7Z5P4 300 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-201ENST00000328923 L3MBTL4Q8NA19 623 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 PPHLN1Q8NEY8 458 aaKnown RBP11.36□□□□□ -0.59
SHMT2-201ENST00000328923 GPRC5AQ8NFJ5 357 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 CREB3L1Q96BA8 519 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 MS4A4AQ96JQ5 239 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 MGLLQ99685 303 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 APOL2Q9BQE5 337 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 CHMP1AQ9HD42 196 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-201ENST00000328923 LAMP5Q9UJQ1 280 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 CLCA2Q9UQC9 943 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 CLCA1A8K7I4 914 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 PRMT3O60678 531 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 HLA-DQB1P01920 261 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 ADRA2AP08913 450 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 MAZP56270 477 aaKnown RBP11.36□□□□□ -0.59
SHMT2-201ENST00000328923 SCAPQ12770 1279 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 PRKG2Q13237 762 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 CPZQ66K79 652 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 NUDT18Q6ZVK8 323 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 ARMCX2Q7L311 632 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 ZNF454Q8N9F8 522 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 ELP5Q8TE02 316 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 HGDQ93099 445 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 FAM162AQ96A26 154 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 NTAN1Q96AB6 310 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 MS4A3Q96HJ5 214 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 NPY6RQ99463 290 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 VRK1Q99986 396 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-201ENST00000328923 MRPL45Q9BRJ2 306 aaKnown RBP11.36□□□□□ -0.59
SHMT2-201ENST00000328923 ZYG11BQ9C0D3 744 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 WNT5BQ9H1J7 359 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 TFB2MQ9H5Q4 396 aaKnown RBP11.36□□□□□ -0.59
SHMT2-201ENST00000328923 SPASTQ9UBP0 616 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 AAR2Q9Y312 384 aaKnown RBP11.36□□□□□ -0.59
SHMT2-201ENST00000328923 GPR45Q9Y5Y3 372 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 PLXNB2O15031 1838 aa11.36□□□□□ -0.59
SHMT2-201ENST00000328923 CHD5Q8TDI0 1954 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 CASP8AP2Q9UKL3 1982 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 MYO1GB0I1T2 1018 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 AOC2O75106 756 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 SERPINA1P01009 418 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 EDN3P14138 238 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 MUC1P15941 1255 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-201ENST00000328923 CLCN3P51790 818 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 SPCS3P61009 180 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 ST3GAL4Q11206 333 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 HNRNPA0Q13151 305 aaKnown RBP11.35□□□□□ -0.59
SHMT2-201ENST00000328923 CRHR2Q13324 411 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 TTLL4Q14679 1199 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 TMEM44Q2T9K0 475 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 KANK2Q63ZY3 851 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 HAGHLQ6PII5 290 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-201ENST00000328923 SPATA19Q7Z5L4 167 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 CBLN2Q8IUK8 224 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 TP53INP2Q8IXH6 220 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 DEFB106AQ8N104 65 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 CRYBG2Q8N1P7 616 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 MOSPD2Q8NHP6 518 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 CREB3L4Q8TEY5 395 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 TWIST2Q8WVJ9 160 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 ZNF583Q96ND8 569 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 ERMAPQ96PL5 475 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-201ENST00000328923 RAD9AQ99638 391 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 CCM2Q9BSQ5 444 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 NDUFAF4Q9P032 175 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 POLG2Q9UHN1 485 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 RALGAPA2Q2PPJ7 1873 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 BRINP1O60477 761 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 NIPSNAP2O75323 286 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 MLYCDO95822 493 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 MT-CYBP00156 380 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-201ENST00000328923 LCP1P13796 627 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 CTSCP53634 463 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 MC2RQ01718 297 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 TNFRSF17Q02223 184 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 GTF2H3Q13889 308 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 PON3Q15166 354 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 UNC50Q53HI1 259 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 CCDC116Q8IYX3 515 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 OXR1Q8N573 874 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 C7orf31Q8N865 590 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 NUDT8Q8WV74 236 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 TBL1YQ9BQ87 522 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 PRKD2Q9BZL6 878 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 TUBB1Q9H4B7 451 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 GORASP2Q9H8Y8 452 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 DLL4Q9NR61 685 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 TREX1Q9NSU2 369 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 SEC14L3Q9UDX4 400 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 AFF4Q9UHB7 1163 aaKnown RBP11.35□□□□□ -0.59
SHMT2-201ENST00000328923 POMT2Q9UKY4 750 aa11.35□□□□□ -0.59
SHMT2-201ENST00000328923 ANXA2P2A6NMY6 339 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 SULT1C2O00338 296 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 SLC31A2O15432 143 aa11.34□□□□□ -0.59
SHMT2-201ENST00000328923 WISP3O95389 354 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-201ENST00000328923 ADH1CP00326 375 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms