RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 GANABQ14697 944 aaKnown RBP12.22□□□□□ -0.45
CCDC60-201ENST00000327554 LEXMQ3ZCV2 418 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 MPPE1Q53F39 396 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 PRSS42Q7Z5A4 293 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 BCDIN3DQ7Z5W3 292 aaKnown RBP12.22□□□□□ -0.45
CCDC60-201ENST00000327554 CDH24Q86UP0 819 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 TMEM163Q8TC26 289 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 CREB3L1Q96BA8 519 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 DUSP26Q9BV47 211 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 ELP3Q9H9T3 547 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 SLC28A3Q9HAS3 691 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 NDOR1Q9UHB4 597 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 CORO2BQ9UQ03 480 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 PPP2R3BQ9Y5P8 575 aa12.22□□□□□ -0.45
CCDC60-201ENST00000327554 ISM1B1AKI9 464 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 M0QZQ0 153 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 GTPBP1O00178 669 aaKnown RBP12.21□□□□□ -0.45
CCDC60-201ENST00000327554 GAPDHSO14556 408 aaPredicted RBP12.21□□□□□ -0.45
CCDC60-201ENST00000327554 GADD45GO95257 159 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 ALDH1A1P00352 501 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 IGFBP1P08833 259 aaPredicted RBP12.21□□□□□ -0.45
CCDC60-201ENST00000327554 HOXD4P09016 255 aaPredicted RBP12.21□□□□□ -0.45
CCDC60-201ENST00000327554 ATF6P18850 670 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 PPIBP23284 216 aaKnown RBP12.21□□□□□ -0.45
CCDC60-201ENST00000327554 HOXD10P28358 340 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 BMP8BP34820 402 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 CASP9P55211 416 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 SRP54P61011 504 aaKnown RBP12.21□□□□□ -0.45
CCDC60-201ENST00000327554 RPS25P62851 125 aaKnown RBP12.21□□□□□ -0.45
CCDC60-201ENST00000327554 FOXD4Q12950 439 aaPredicted RBP12.21□□□□□ -0.45
CCDC60-201ENST00000327554 C1DQ13901 141 aaKnown RBP12.21□□□□□ -0.45
CCDC60-201ENST00000327554 COX20Q5RI15 118 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 METAP1DQ6UB28 335 aaPredicted RBP12.21□□□□□ -0.45
CCDC60-201ENST00000327554 TMEM107Q6UX40 140 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 KIAA1324Q6UXG2 1013 aaKnown RBP12.21□□□□□ -0.45
CCDC60-201ENST00000327554 CERS6Q6ZMG9 384 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 HDDC2Q7Z4H3 204 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 BMP8AQ7Z5Y6 402 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 L3MBTL4Q8NA19 623 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 OR11H4Q8NGC9 324 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 CDC26Q8NHZ8 85 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 MTERF3Q96E29 417 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 SORCS2Q96PQ0 1159 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 TM9SF2Q99805 663 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 TSSK6Q9BXA6 273 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 MRPL9Q9BYD2 267 aaKnown RBP12.21□□□□□ -0.45
CCDC60-201ENST00000327554 ZNF224Q9NZL3 707 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 REV1Q9UBZ9 1251 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 A0A0A6YYJ9 748 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 PRAMEF33A0A0G2JMD5 474 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 ARRDC5A6NEK1 342 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 PRR23AA6NEV1 266 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 AKAP8O43823 692 aaKnown RBP12.21□□□□□ -0.45
CCDC60-201ENST00000327554 PRAMEF10O60809 474 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 PRAMEF1O95521 474 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 IGLV3-27P01718 113 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 ANXA5P08758 320 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 ETFAP13804 333 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 C21orf58P58505 322 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 BTG1P62324 171 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 RBBP4Q09028 425 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 CLLU1Q5K131 121 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 TYW3Q6IPR3 259 aaKnown RBP12.21□□□□□ -0.45
CCDC60-201ENST00000327554 CEACAM20Q6UY09 585 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 USP30Q70CQ3 517 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 GPAT4Q86UL3 456 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.21□□□□□ -0.45
CCDC60-201ENST00000327554 PCNPQ8WW12 178 aaKnown RBP12.21□□□□□ -0.45
CCDC60-201ENST00000327554 UCN3Q969E3 161 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 METTL2AQ96IZ6 378 aaKnown RBP12.21□□□□□ -0.45
CCDC60-201ENST00000327554 SPON2Q9BUD6 331 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 ADGRE3Q9BY15 652 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 LATS2Q9NRM7 1088 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 RHCGQ9UBD6 479 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 SRRDQ9UH36 339 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 BTNL2Q9UIR0 455 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 SCML1Q9UN30 329 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 ING4Q9UNL4 249 aa12.21□□□□□ -0.45
CCDC60-201ENST00000327554 SF3B6Q9Y3B4 125 aaKnown RBP12.21□□□□□ -0.45
CCDC60-201ENST00000327554 RPL36Q9Y3U8 105 aaKnown RBP12.21□□□□□ -0.45
CCDC60-201ENST00000327554 ZNF106Q9H2Y7 1883 aaKnown RBP12.21□□□□□ -0.46
CCDC60-201ENST00000327554 NINQ8N4C6 2090 aa12.21□□□□□ -0.46
CCDC60-201ENST00000327554 HELZP42694 1942 aaKnown RBP12.2□□□□□ -0.46
CCDC60-201ENST00000327554 SERTM1A2A2V5 107 aa12.2□□□□□ -0.46
CCDC60-201ENST00000327554 HEPACAM2A8MVW5 462 aa12.2□□□□□ -0.46
CCDC60-201ENST00000327554 RECKO95980 971 aa12.2□□□□□ -0.46
CCDC60-201ENST00000327554 TACR2P21452 398 aa12.2□□□□□ -0.46
CCDC60-201ENST00000327554 EVX1P49640 407 aa12.2□□□□□ -0.46
CCDC60-201ENST00000327554 IL18Q14116 193 aa12.2□□□□□ -0.46
CCDC60-201ENST00000327554 SF1Q15637 639 aaKnown RBP12.2□□□□□ -0.46
CCDC60-201ENST00000327554 GRK1Q15835 563 aa12.2□□□□□ -0.46
CCDC60-201ENST00000327554 PLK5Q496M5 336 aa12.2□□□□□ -0.46
CCDC60-201ENST00000327554 FRG2Q64ET8 278 aa12.2□□□□□ -0.46
CCDC60-201ENST00000327554 C12orf73Q69YU5 71 aa12.2□□□□□ -0.46
CCDC60-201ENST00000327554 FAM151BQ6UXP7 276 aa12.2□□□□□ -0.46
CCDC60-201ENST00000327554 ZNF852Q6ZMS4 543 aa12.2□□□□□ -0.46
CCDC60-201ENST00000327554 TM9SF4Q92544 642 aa12.2□□□□□ -0.46
CCDC60-201ENST00000327554 FRG2BQ96QU4 278 aa12.2□□□□□ -0.46
CCDC60-201ENST00000327554 MAGEH1Q9H213 219 aa12.2□□□□□ -0.46
CCDC60-201ENST00000327554 FOLH1BQ9HBA9 442 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms