RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 CACTIN-AS1Q8N1I8 211 aa15.98■□□□□ 0.15
SSH1-201ENST00000326470 CLDN22Q8N7P3 220 aa15.98■□□□□ 0.15
SSH1-201ENST00000326470 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.98■□□□□ 0.15
SSH1-201ENST00000326470 VOPP1Q96AW1 172 aa15.98■□□□□ 0.15
SSH1-201ENST00000326470 RNF31Q96EP0 1072 aa15.98■□□□□ 0.15
SSH1-201ENST00000326470 ZIC5Q96T25 663 aa15.98■□□□□ 0.15
SSH1-201ENST00000326470 UCK2Q9BZX2 261 aa15.98■□□□□ 0.15
SSH1-201ENST00000326470 ARHGAP39Q9C0H5 1083 aa15.98■□□□□ 0.15
SSH1-201ENST00000326470 PRM3Q9NNZ6 103 aa15.98■□□□□ 0.15
SSH1-201ENST00000326470 TRBV4-1A0A0J9YWV2 114 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 ARHGEF33A8MVX0 844 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 FAM227AF5H4B4 570 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 SEPT4O43236 478 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 SRPRAP08240 638 aaKnown RBP15.97■□□□□ 0.15
SSH1-201ENST00000326470 ARAFP10398 606 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 HLA-DMAP28067 261 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 GATMP50440 423 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 RPS13P62277 151 aaKnown RBP15.97■□□□□ 0.15
SSH1-201ENST00000326470 CD83Q01151 205 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 BNC1Q01954 994 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 MXD1Q05195 221 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 VEPH1Q14D04 833 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.97■□□□□ 0.15
SSH1-201ENST00000326470 LIPKQ5VXJ0 399 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 LIX1LQ8IVB5 337 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 OR2AP1Q8NGE2 309 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 ASZ1Q8WWH4 475 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 MED8Q96G25 268 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 DIRAS2Q96HU8 199 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 BEX2Q9BXY8 128 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 RC3H2Q9HBD1 1191 aaKnown RBP15.97■□□□□ 0.15
SSH1-201ENST00000326470 TRIM39Q9HCM9 518 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 ANGPT4Q9Y264 503 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 PPIL1Q9Y3C6 166 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 A0A1W2PQL4 384 aaPredicted RBP15.97■□□□□ 0.15
SSH1-201ENST00000326470 ERVH48-1M5A8F1 160 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 FFAR1O14842 300 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 PLD2O14939 933 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 GPR37L1O60883 481 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 TMCC2O75069 709 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 CHI3L1P36222 383 aaPredicted RBP15.97■□□□□ 0.15
SSH1-201ENST00000326470 FEN1P39748 380 aaKnown RBP15.97■□□□□ 0.15
SSH1-201ENST00000326470 KIR2DL3P43628 341 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 ZNF91Q05481 1191 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 ZNF763Q0D2J5 394 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 C1DQ13901 141 aaKnown RBP15.97■□□□□ 0.15
SSH1-201ENST00000326470 ZDHHC20Q5W0Z9 365 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 CCSAPQ6IQ19 270 aaPredicted RBP15.97■□□□□ 0.15
SSH1-201ENST00000326470 SLC8B1Q6J4K2 584 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 TCTE3Q8IZS6 198 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 CIDECQ96AQ7 238 aaPredicted RBP15.97■□□□□ 0.15
SSH1-201ENST00000326470 SLC6A18Q96N87 628 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 CASD1Q96PB1 797 aa15.97■□□□□ 0.15
SSH1-201ENST00000326470 WRAP53Q9BUR4 548 aaKnown RBP15.97■□□□□ 0.15
SSH1-201ENST00000326470 TXNL4BQ9NX01 149 aaKnown RBP15.97■□□□□ 0.15
SSH1-201ENST00000326470 STOX2Q9P2F5 926 aaPredicted RBP15.97■□□□□ 0.15
SSH1-201ENST00000326470 PLEKHB1Q9UF11 243 aaPredicted RBP15.97■□□□□ 0.15
SSH1-201ENST00000326470 TMA7Q9Y2S6 64 aaKnown RBP15.97■□□□□ 0.15
SSH1-201ENST00000326470 MTX2O75431 263 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 SLCO2B1O94956 709 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 MSL3P1P0C860 447 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 RPL17P18621 184 aaKnown RBP15.96■□□□□ 0.15
SSH1-201ENST00000326470 ERP29P30040 261 aaKnown RBP15.96■□□□□ 0.15
SSH1-201ENST00000326470 OR1D2P34982 312 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 C19orf57Q0VDD7 668 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 HNRNPA0Q13151 305 aaKnown RBP15.96■□□□□ 0.15
SSH1-201ENST00000326470 PUM1Q14671 1186 aaKnown RBP eCLIP15.96■□□□□ 0.15
SSH1-201ENST00000326470 MPEG1Q2M385 716 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 SAXO2Q658L1 398 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 C12orf73Q69YU5 71 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 HSDL2Q6YN16 418 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.96■□□□□ 0.15
SSH1-201ENST00000326470 PEX5LQ8IYB4 626 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 CADM2Q8N3J6 435 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 IL17RCQ8NAC3 791 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 OR5AK3PQ8NH89 298 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 ZFAND1Q8TCF1 268 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 UBASH3BQ8TF42 649 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 KIAA1143Q96AT1 154 aaPredicted RBP15.96■□□□□ 0.15
SSH1-201ENST00000326470 REPS1Q96D71 796 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 ECHDC3Q96DC8 303 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 PLA2G10O15496 165 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 GREM1O60565 184 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 PSIP1O75475 530 aaKnown RBP15.96■□□□□ 0.15
SSH1-201ENST00000326470 CSF2P04141 144 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 FHP07954 510 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 FURINP09958 794 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 SPINT3P49223 89 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 LIM2P55344 173 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 PLD1Q13393 1074 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 PDE7AQ13946 482 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 QPRTQ15274 297 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 DDI2Q5TDH0 399 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 MFSD4BQ5TF39 518 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 TRIM48Q8IWZ4 208 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 KLHDC8AQ8IYD2 350 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 PKP4Q99569 1192 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 TSSK6Q9BXA6 273 aa15.96■□□□□ 0.15
SSH1-201ENST00000326470 TMEM121BQ9BXQ6 578 aaPredicted RBP15.96■□□□□ 0.15
SSH1-201ENST00000326470 IRF2BPLQ9H1B7 796 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms