RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 QSOX1O00391 747 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 NME6O75414 186 aaPredicted RBP12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 INPP1P49441 399 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 XKP51811 444 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 OR2B6P58173 313 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 NOGQ13253 232 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 PIN1Q13526 163 aaPredicted RBP12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 SF3B4Q15427 424 aaKnown RBP eCLIP12.31□□□□□ -0.441e-6■■■□□ 15.6
HMGCS1-201ENST00000325110 FAM131AQ6UXB0 335 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 TMC5Q6UXY8 1006 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 TMPRSS11AQ6ZMR5 421 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 TRAM1L1Q8N609 369 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 ITPKCQ96DU7 683 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 TMEM19Q96HH6 336 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 NDEL1Q9GZM8 345 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 DMRT3Q9NQL9 472 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 CREBZFQ9NS37 354 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 CFL2Q9Y281 166 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 PADI2Q9Y2J8 665 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 ENPP4Q9Y6X5 453 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 H7BY64 318 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 PITPNM1O00562 1244 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 RNASET2O00584 256 aaKnown RBP12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 ARHGAP33O14559 1287 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 TSPAN19P0C672 248 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 CCR2P41597 374 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 GSTM5P46439 218 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 CLEC12AQ5QGZ9 265 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 PRAMEF14Q5SWL7 426 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 PRAMEF13Q5VWM6 474 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 FRMPD2BQ6IN97 320 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 USP30Q70CQ3 517 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 SHFQ7M4L6 423 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 C17orf64Q86WR6 236 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 FAM20CQ8IXL6 584 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 ZFP41Q8N8Y5 198 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 NACC2Q96BF6 587 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 ECHDC3Q96DC8 303 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 PRAP1Q96NZ9 151 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 MACROD1Q9BQ69 325 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 SLC30A2Q9BRI3 323 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 GPATCH2Q9NW75 528 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 PCDHGA2Q9Y5H1 932 aa12.31□□□□□ -0.44
HMGCS1-201ENST00000325110 AGAP14A8MT82 685 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 M0R3H8 397 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 DSCR3O14972 297 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 GPR37L1O60883 481 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 UGT2B17O75795 530 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 FGF18O76093 207 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 SLCO2B1O94956 709 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 FHP07954 510 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 ZNF630Q2M218 657 aaPredicted RBP12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 ARHGAP15Q53QZ3 475 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 REEP3Q6NUK4 255 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 PAQR6Q6TCH4 344 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 TRIM69Q86WT6 500 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 OR5D16Q8NGK9 328 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 OR5AR1Q8NGP9 310 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 OR9A1PQ8NGU1 263 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 CHTF18Q8WVB6 975 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 PITX2Q99697 317 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 ZCCHC2Q9C0B9 1178 aaKnown RBP12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 SPHK2Q9NRA0 654 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 QPCTLQ9NXS2 382 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 PCDHGA4Q9Y5G9 962 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 LATO43561 262 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 PSIP1O75475 530 aaKnown RBP12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 GCM2O75603 506 aaPredicted RBP12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 CDRT1O95170 752 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 CH25HO95992 272 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 ADH1AP07327 375 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 NPPBP16860 134 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 LAG3P18627 525 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 PSMB5P28074 263 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 SSTR4P31391 388 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 KCNC3Q14003 757 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 PDZK1Q5T2W1 519 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 LIPIQ6XZB0 460 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 CCDC149Q6ZUS6 474 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 UCK2Q9BZX2 261 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 BHLHE41Q9C0J9 482 aaPredicted RBP12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 CXorf36Q9H7Y0 433 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 AHSPQ9NZD4 102 aa12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 SPIN1Q9Y657 262 aaPredicted RBP12.3□□□□□ -0.44
HMGCS1-201ENST00000325110 IGLV3-16A0A075B6K0 115 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 C1orf226A1L170 272 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 TAF4O00268 1085 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 OR1F1O43749 312 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 UGDHO60701 494 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 KCNK2O95069 426 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 C1orf105O95561 183 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 FURINP09958 794 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 HSD3B1P14060 373 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 HSD3B2P26439 372 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 WASP42768 502 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 SNAPC1Q16533 368 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 ZNF181Q2M3W8 571 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 FBXO43Q4G163 708 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 KRT78Q8N1N4 520 aa12.29□□□□□ -0.44
HMGCS1-201ENST00000325110 CPXM2Q8N436 756 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms