RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 PPT2Q9UMR5 302 aa27.29■■□□□ 1.96
SYNGR1-202ENST00000318801 ZNF500O60304 480 aaPredicted RBP27.28■■□□□ 1.96
SYNGR1-202ENST00000318801 ATP5F1P24539 256 aaPredicted RBP27.28■■□□□ 1.96
SYNGR1-202ENST00000318801 PPP2R1BP30154 601 aa27.28■■□□□ 1.96
SYNGR1-202ENST00000318801 CCT5P48643 541 aa27.28■■□□□ 1.96
SYNGR1-202ENST00000318801 NEK2P51955 445 aa27.28■■□□□ 1.96
SYNGR1-202ENST00000318801 ELAVL1Q15717 326 aaKnown RBP27.28■■□□□ 1.96
SYNGR1-202ENST00000318801 CLNKQ7Z7G1 428 aa27.28■■□□□ 1.96
SYNGR1-202ENST00000318801 GPR180Q86V85 440 aa27.28■■□□□ 1.96
SYNGR1-202ENST00000318801 BEST3Q8N1M1 668 aa27.28■■□□□ 1.96
SYNGR1-202ENST00000318801 ZCCHC7Q8N3Z6 543 aaKnown RBP27.28■■□□□ 1.96
SYNGR1-202ENST00000318801 TMEM151AQ8N4L1 468 aa27.28■■□□□ 1.96
SYNGR1-202ENST00000318801 WDR20Q8TBZ3 569 aa27.28■■□□□ 1.96
SYNGR1-202ENST00000318801 MTFMTQ96DP5 389 aaKnown RBP27.28■■□□□ 1.96
SYNGR1-202ENST00000318801 CCDC126Q96EE4 140 aa27.28■■□□□ 1.96
SYNGR1-202ENST00000318801 NSUN5Q96P11 429 aaKnown RBP27.28■■□□□ 1.96
SYNGR1-202ENST00000318801 CDCP1Q9H5V8 836 aa27.28■■□□□ 1.96
SYNGR1-202ENST00000318801 NMRK1Q9NWW6 199 aa27.28■■□□□ 1.96
SYNGR1-202ENST00000318801 SNX6Q9UNH7 406 aa27.28■■□□□ 1.96
SYNGR1-202ENST00000318801 PLPP1O14494 284 aa27.27■■□□□ 1.96
SYNGR1-202ENST00000318801 FCHO1O14526 889 aa27.27■■□□□ 1.96
SYNGR1-202ENST00000318801 PRAMEF2O60811 474 aa27.27■■□□□ 1.96
SYNGR1-202ENST00000318801 SUPT7LO94864 414 aa27.27■■□□□ 1.96
SYNGR1-202ENST00000318801 RPS17P08708 135 aaKnown RBP27.27■■□□□ 1.96
SYNGR1-202ENST00000318801 TNNI3P19429 210 aa27.27■■□□□ 1.96
SYNGR1-202ENST00000318801 BUD31P41223 144 aaPredicted RBP27.27■■□□□ 1.96
SYNGR1-202ENST00000318801 OC90Q02509 493 aaPredicted RBP27.27■■□□□ 1.96
SYNGR1-202ENST00000318801 GGTA1PQ4G0N0 100 aa27.27■■□□□ 1.96
SYNGR1-202ENST00000318801 TDRPQ86YL5 185 aa27.27■■□□□ 1.96
SYNGR1-202ENST00000318801 RNF175Q8N4F7 328 aa27.27■■□□□ 1.96
SYNGR1-202ENST00000318801 BCORP1Q8N888 145 aa27.27■■□□□ 1.96
SYNGR1-202ENST00000318801 MYRIPQ8NFW9 859 aa27.27■■□□□ 1.96
SYNGR1-202ENST00000318801 GRHL3Q8TE85 626 aa27.27■■□□□ 1.96
SYNGR1-202ENST00000318801 ZNF483Q8TF39 744 aaPredicted RBP27.27■■□□□ 1.96
SYNGR1-202ENST00000318801 TANKQ92844 425 aa27.27■■□□□ 1.96
SYNGR1-202ENST00000318801 VMP1Q96GC9 406 aa27.27■■□□□ 1.96
SYNGR1-202ENST00000318801 CSF3RQ99062 836 aa27.27■■□□□ 1.96
SYNGR1-202ENST00000318801 WDR41Q9HAD4 459 aa27.27■■□□□ 1.96
SYNGR1-202ENST00000318801 LYARQ9NX58 379 aaKnown RBP27.27■■□□□ 1.96
SYNGR1-202ENST00000318801 VTI1BQ9UEU0 232 aa27.27■■□□□ 1.96
SYNGR1-202ENST00000318801 STK38LQ9Y2H1 464 aa27.27■■□□□ 1.96
SYNGR1-202ENST00000318801 DYRK3O43781 588 aa27.26■■□□□ 1.95
SYNGR1-202ENST00000318801 COX7A2P14406 83 aa27.26■■□□□ 1.95
SYNGR1-202ENST00000318801 HNRNPFP52597 415 aaKnown RBP27.26■■□□□ 1.95
SYNGR1-202ENST00000318801 UBAP2LQ14157 1087 aaKnown RBP27.26■■□□□ 1.95
SYNGR1-202ENST00000318801 FHL5Q5TD97 284 aa27.26■■□□□ 1.95
SYNGR1-202ENST00000318801 FAM26EQ8N5C1 309 aa27.26■■□□□ 1.95
SYNGR1-202ENST00000318801 TMEM52Q8NDY8 209 aa27.26■■□□□ 1.95
SYNGR1-202ENST00000318801 NFAM1Q8NET5 270 aaPredicted RBP27.26■■□□□ 1.95
SYNGR1-202ENST00000318801 OR4F6Q8NGB9 312 aa27.26■■□□□ 1.95
SYNGR1-202ENST00000318801 FAR1Q8WVX9 515 aa27.26■■□□□ 1.95
SYNGR1-202ENST00000318801 BARD1Q99728 777 aaKnown RBP27.26■■□□□ 1.95
SYNGR1-202ENST00000318801 RPF2Q9H7B2 306 aaKnown RBP27.26■■□□□ 1.95
SYNGR1-202ENST00000318801 ANKZF1Q9H8Y5 726 aa27.26■■□□□ 1.95
SYNGR1-202ENST00000318801 ZBTB26Q9HCK0 441 aa27.26■■□□□ 1.95
SYNGR1-202ENST00000318801 SMIM23A6NLE4 172 aa27.25■■□□□ 1.95
SYNGR1-202ENST00000318801 CDH16O75309 829 aa27.25■■□□□ 1.95
SYNGR1-202ENST00000318801 GLRA3O75311 464 aa27.25■■□□□ 1.95
SYNGR1-202ENST00000318801 SEMA3DO95025 777 aa27.25■■□□□ 1.95
SYNGR1-202ENST00000318801 SLU7O95391 586 aaKnown RBP27.25■■□□□ 1.95
SYNGR1-202ENST00000318801 SBK3P0C264 359 aa27.25■■□□□ 1.95
SYNGR1-202ENST00000318801 CD46P15529 392 aa27.25■■□□□ 1.95
SYNGR1-202ENST00000318801 IMPDH1P20839 514 aa27.25■■□□□ 1.95
SYNGR1-202ENST00000318801 SLCO1A2P46721 670 aa27.25■■□□□ 1.95
SYNGR1-202ENST00000318801 CDH13P55290 713 aa27.25■■□□□ 1.95
SYNGR1-202ENST00000318801 CLCQ05315 142 aa27.25■■□□□ 1.95
SYNGR1-202ENST00000318801 TRAF3Q13114 568 aa27.25■■□□□ 1.95
SYNGR1-202ENST00000318801 RASA2Q15283 850 aa27.25■■□□□ 1.95
SYNGR1-202ENST00000318801 NR6A1Q15406 480 aa27.25■■□□□ 1.95
SYNGR1-202ENST00000318801 PAGE2Q7Z2X7 111 aa27.25■■□□□ 1.95
SYNGR1-202ENST00000318801 NUDT13Q86X67 352 aa27.25■■□□□ 1.95
SYNGR1-202ENST00000318801 AMER2Q8N7J2 671 aa27.25■■□□□ 1.95
SYNGR1-202ENST00000318801 DDX31Q9H8H2 851 aaKnown RBP27.25■■□□□ 1.95
SYNGR1-202ENST00000318801 GRID1Q9ULK0 1009 aa27.25■■□□□ 1.95
SYNGR1-202ENST00000318801 LRRK2Q5S007 2527 aa27.25■■□□□ 1.95
SYNGR1-202ENST00000318801 ARHGAP10A1A4S6 786 aa27.24■■□□□ 1.95
SYNGR1-202ENST00000318801 GABRR3A8MPY1 467 aa27.24■■□□□ 1.95
SYNGR1-202ENST00000318801 RASAL1O95294 804 aa27.24■■□□□ 1.95
SYNGR1-202ENST00000318801 MLYCDO95822 493 aa27.24■■□□□ 1.95
SYNGR1-202ENST00000318801 CRYABP02511 175 aaKnown RBP27.24■■□□□ 1.95
SYNGR1-202ENST00000318801 SHBGP04278 402 aa27.24■■□□□ 1.95
SYNGR1-202ENST00000318801 HSD17B3P37058 310 aa27.24■■□□□ 1.95
SYNGR1-202ENST00000318801 TUBA3CQ13748 450 aa27.24■■□□□ 1.95
SYNGR1-202ENST00000318801 TUBA3EQ6PEY2 450 aa27.24■■□□□ 1.95
SYNGR1-202ENST00000318801 KIF2BQ8N4N8 673 aa27.24■■□□□ 1.95
SYNGR1-202ENST00000318801 OR14A16Q8NHC5 309 aa27.24■■□□□ 1.95
SYNGR1-202ENST00000318801 TRPC4APQ8TEL6 797 aa27.24■■□□□ 1.95
SYNGR1-202ENST00000318801 RBM18Q96H35 190 aaKnown RBP27.24■■□□□ 1.95
SYNGR1-202ENST00000318801 C5orf34Q96MH7 638 aa27.24■■□□□ 1.95
SYNGR1-202ENST00000318801 SORBS1Q9BX66 1292 aaKnown RBP27.24■■□□□ 1.95
SYNGR1-202ENST00000318801 PPIEQ9UNP9 301 aaKnown RBP27.24■■□□□ 1.95
SYNGR1-202ENST00000318801 PCDHGB6Q9Y5F9 930 aa27.24■■□□□ 1.95
SYNGR1-202ENST00000318801 SVILO95425 2214 aa27.24■■□□□ 1.95
SYNGR1-202ENST00000318801 TRBV11-1A0A0K0K1C0 115 aa27.23■■□□□ 1.95
SYNGR1-202ENST00000318801 ANKUB1A6NFN9 424 aa27.23■■□□□ 1.95
SYNGR1-202ENST00000318801 DLX3O60479 287 aa27.23■■□□□ 1.95
SYNGR1-202ENST00000318801 LDB3O75112 727 aa27.23■■□□□ 1.95
SYNGR1-202ENST00000318801 CBX6O95503 412 aa27.23■■□□□ 1.95
SYNGR1-202ENST00000318801 CD96P40200 585 aa27.23■■□□□ 1.95
SYNGR1-202ENST00000318801 UQCRFS1P47985 274 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms