RNA–Protein interactions for RNA: ENST00000316485.11

PATJ-202, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 5 BASIC

Gene PATJ, Length 3,657 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-202ENST00000316485 ERVK-11Q9UQG0 969 aa4.24□□□□□ -1.73
PATJ-202ENST00000316485 MRPS2Q9Y399 296 aaKnown RBP4.24□□□□□ -1.73
PATJ-202ENST00000316485 TSC22D4Q9Y3Q8 395 aa4.24□□□□□ -1.73
PATJ-202ENST00000316485 NEUROG3Q9Y4Z2 214 aa4.24□□□□□ -1.73
PATJ-202ENST00000316485 NCOR1O75376 2440 aa4.24□□□□□ -1.73
PATJ-202ENST00000316485 SPTBN2O15020 2390 aa4.24□□□□□ -1.73
PATJ-202ENST00000316485 ASXL3Q9C0F0 2248 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 TECTAO75443 2155 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 CEP192Q8TEP8 1941 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 A0A0A6YYD5 115 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 A0A1W2PR48 441 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 TCRBV3S1A0A5B6 114 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 FAM221BA6H8Z2 402 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 RNASET2O00584 256 aaKnown RBP4.23□□□□□ -1.73
PATJ-202ENST00000316485 HCRTR1O43613 425 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 B3GALT2O43825 422 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 CREG1O75629 220 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 PRKD3O94806 890 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 AIFM1O95831 613 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 OPN1SWP03999 348 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 C8BP07358 591 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 CKMT2P17540 419 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 DDX5P17844 614 aaKnown RBP4.23□□□□□ -1.73
PATJ-202ENST00000316485 GGT1P19440 569 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 FASP25445 335 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 CDK9P50750 372 aaKnown RBP4.23□□□□□ -1.73
PATJ-202ENST00000316485 POLE2P56282 527 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 SNRPNP63162 240 aaKnown RBP4.23□□□□□ -1.73
PATJ-202ENST00000316485 VAC14Q08AM6 782 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 HYAL2Q12891 473 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 PPP1R8Q12972 351 aaKnown RBP4.23□□□□□ -1.73
PATJ-202ENST00000316485 COX20Q5RI15 118 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 TMTC4Q5T4D3 741 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 ENPP6Q6UWR7 440 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 MSANTD1Q6ZTZ1 278 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 KBTBD2Q8IY47 623 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 ADGRG5Q8IZF4 528 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 ZNF655Q8N720 491 aaPredicted RBP4.23□□□□□ -1.73
PATJ-202ENST00000316485 C19orf47Q8N9M1 422 aaKnown RBP4.23□□□□□ -1.73
PATJ-202ENST00000316485 FLVCR1-AS1Q8TAF5 88 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 BAHD1Q8TBE0 780 aaPredicted RBP4.23□□□□□ -1.73
PATJ-202ENST00000316485 NETO1Q8TDF5 533 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 UTP15Q8TED0 518 aaKnown RBP4.23□□□□□ -1.73
PATJ-202ENST00000316485 EDAQ92838 391 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 GAL3ST3Q96A11 431 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 SLCO4A1Q96BD0 722 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 ZBED6CLQ96FA7 236 aaPredicted RBP4.23□□□□□ -1.73
PATJ-202ENST00000316485 OR2A5Q96R48 311 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 ELF4Q99607 663 aaPredicted RBP4.23□□□□□ -1.73
PATJ-202ENST00000316485 CIB1Q99828 191 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 GTPBP2Q9BX10 602 aaKnown RBP4.23□□□□□ -1.73
PATJ-202ENST00000316485 CXorf36Q9H7Y0 433 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 DDX31Q9H8H2 851 aaKnown RBP4.23□□□□□ -1.73
PATJ-202ENST00000316485 EQTNQ9NQ60 294 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 PRDM7Q9NQW5 492 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 DLGAP2Q9P1A6 1054 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 BTNL2Q9UIR0 455 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 RNF215Q9Y6U7 377 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 LRP4O75096 1905 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 COL6A3P12111 3177 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 TRBV5-3A0A0A0MS03 114 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 A0A1W2PS29 197 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 FAM220BPB1ANY3 271 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 PATE3B3GLJ2 98 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 C10orf142B7Z368 130 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 SGK494L7N484 410 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 CASC3O15234 703 aaKnown RBP4.23□□□□□ -1.73
PATJ-202ENST00000316485 DNAJB6O75190 326 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 NME6O75414 186 aaPredicted RBP4.23□□□□□ -1.73
PATJ-202ENST00000316485 CTSBP07858 339 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 NR2F6P10588 404 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 ALOX12P18054 663 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 BUD31P41223 144 aaPredicted RBP4.23□□□□□ -1.73
PATJ-202ENST00000316485 AQP4P55087 323 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 LRRC74AQ0VAA2 488 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 SLC5A12Q1EHB4 618 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 FAM98BQ52LJ0 330 aaKnown RBP4.23□□□□□ -1.73
PATJ-202ENST00000316485 SFT2D3Q587I9 215 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 ISLR2Q6UXK2 745 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 ABHD13Q7L211 337 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 MCATQ8IVS2 390 aaKnown RBP4.23□□□□□ -1.73
PATJ-202ENST00000316485 RBM12BQ8IXT5 1001 aaKnown RBP4.23□□□□□ -1.73
PATJ-202ENST00000316485 FAM86B1Q8N7N1 296 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 ADCY4Q8NFM4 1077 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 OR5T3Q8NGG3 340 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 C1orf216Q8TAB5 229 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.23□□□□□ -1.73
PATJ-202ENST00000316485 ZFP90Q8TF47 636 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 RAB8BQ92930 207 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 MTERF3Q96E29 417 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 SLC47A1Q96FL8 570 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 CHID1Q9BWS9 393 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 VCXQ9H320 206 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 MUC13Q9H3R2 512 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 SEMA6CQ9H3T2 930 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 ANKRA2Q9H9E1 313 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 CAPN10Q9HC96 672 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 SLAMF7Q9NQ25 335 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 SLC35C2Q9NQQ7 365 aa4.23□□□□□ -1.73
PATJ-202ENST00000316485 ZCCHC3Q9NUD5 404 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms