RNA–Protein interactions for RNA: ENST00000314028.10

CSNK1D-202, Transcript of casein kinase 1 delta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CSNK1D, Length 3,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-202ENST00000314028 LRR1Q96L50 414 aa13.72□□□□□ -0.21
CSNK1D-202ENST00000314028 PKMYT1Q99640 499 aa13.72□□□□□ -0.21
CSNK1D-202ENST00000314028 CCDC177Q9NQR7 707 aaPredicted RBP13.72□□□□□ -0.21
CSNK1D-202ENST00000314028 HSPE1-MOB4S4R3N1 261 aa13.72□□□□□ -0.21
CSNK1D-202ENST00000314028 BRWD3Q6RI45 1802 aa13.72□□□□□ -0.21
CSNK1D-202ENST00000314028 CCL16O15467 120 aa13.72□□□□□ -0.21
CSNK1D-202ENST00000314028 HNRNPFP52597 415 aaKnown RBP13.72□□□□□ -0.21
CSNK1D-202ENST00000314028 GINS1Q14691 196 aa13.72□□□□□ -0.21
CSNK1D-202ENST00000314028 ZNF730Q6ZMV8 503 aa13.72□□□□□ -0.21
CSNK1D-202ENST00000314028 MMP21Q8N119 569 aa13.72□□□□□ -0.21
CSNK1D-202ENST00000314028 HRASLS5Q96KN8 279 aa13.72□□□□□ -0.21
CSNK1D-202ENST00000314028 PIP5K1AQ99755 562 aa13.72□□□□□ -0.21
CSNK1D-202ENST00000314028 RHBGQ9H310 441 aa13.72□□□□□ -0.21
CSNK1D-202ENST00000314028 FBXO8Q9NRD0 319 aa13.72□□□□□ -0.21
CSNK1D-202ENST00000314028 CMAHPQ9Y471 501 aa13.72□□□□□ -0.21
CSNK1D-202ENST00000314028 M0R3H8 397 aa13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 WISP3O95389 354 aaPredicted RBP13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 RPLP2P05387 115 aaKnown RBP13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 NOS3P29474 1203 aa13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 TIA1P31483 386 aaKnown RBP eCLIP13.71□□□□□ -0.215e-7■□□□□ 10.1
CSNK1D-202ENST00000314028 SDC2P34741 201 aa13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 MICAQ29983 383 aa13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 BTBD16Q32M84 506 aa13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 PPP2R2DQ66LE6 453 aa13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 MARCH9Q86YJ5 346 aa13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 ATP6V1C2Q8NEY4 427 aa13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 WDR48Q8TAF3 677 aa13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 KCTD7Q96MP8 289 aa13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 ZNF607Q96SK3 696 aa13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 MRPL9Q9BYD2 267 aaKnown RBP13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 REEP4Q9H6H4 257 aa13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 TMEM184CQ9NVA4 438 aa13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 YARS2Q9Y2Z4 477 aaKnown RBP13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 RPL36Q9Y3U8 105 aaKnown RBP13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 PRAMEF33A0A0G2JMD5 474 aa13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 KMOO15229 486 aa13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 PRAMEF10O60809 474 aa13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 PCDH8O95206 1070 aa13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 POP4O95707 220 aaKnown RBP13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 GASTP01350 101 aa13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 CYP17A1P05093 508 aa13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 MAP4K2Q12851 820 aa13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 CHST9Q7L1S5 443 aa13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 C1QTNF3Q9BXJ4 246 aa13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 SLC12A9Q9BXP2 914 aa13.71□□□□□ -0.21
CSNK1D-202ENST00000314028 ZSCAN5BA6NJL1 495 aa13.71□□□□□ -0.22
CSNK1D-202ENST00000314028 M0R082 166 aa13.71□□□□□ -0.22
CSNK1D-202ENST00000314028 FCER2P06734 321 aa13.71□□□□□ -0.22
CSNK1D-202ENST00000314028 HOXB6P17509 224 aaKnown RBP13.71□□□□□ -0.22
CSNK1D-202ENST00000314028 CHMP24386 653 aa13.71□□□□□ -0.22
CSNK1D-202ENST00000314028 HOXA9P31269 272 aa13.71□□□□□ -0.22
CSNK1D-202ENST00000314028 CTSCP53634 463 aa13.71□□□□□ -0.22
CSNK1D-202ENST00000314028 MPPE1Q53F39 396 aa13.71□□□□□ -0.22
CSNK1D-202ENST00000314028 C22orf39Q6P5X5 142 aa13.71□□□□□ -0.22
CSNK1D-202ENST00000314028 VN1R5Q7Z5H4 357 aa13.71□□□□□ -0.22
CSNK1D-202ENST00000314028 SLC43A3Q8NBI5 491 aa13.71□□□□□ -0.22
CSNK1D-202ENST00000314028 C9orf43Q8TAL5 461 aaPredicted RBP13.71□□□□□ -0.22
CSNK1D-202ENST00000314028 RELTQ969Z4 430 aa13.71□□□□□ -0.22
CSNK1D-202ENST00000314028 TMEM80Q96HE8 168 aa13.71□□□□□ -0.22
CSNK1D-202ENST00000314028 A0A1W2PPK0 400 aa13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 SDHBP21912 280 aa13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 RPS19P39019 145 aaKnown RBP13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 TBPL1P62380 186 aa13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 CBX2Q14781 532 aaPredicted RBP13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 C9orf64Q5T6V5 341 aa13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 FRMPD2BQ6IN97 320 aa13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 VASH1Q7L8A9 365 aaPredicted RBP13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 PTOV1Q86YD1 416 aa13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 NPAS4Q8IUM7 802 aa13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 OR8H3Q8N146 312 aa13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 OXR1Q8N573 874 aa13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 LILRB4Q8NHJ6 448 aa13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 TEFMQ96QE5 360 aaKnown RBP13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 OR2B2Q9GZK3 357 aa13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 CXXC1Q9P0U4 656 aaPredicted RBP13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 MBD1Q9UIS9 605 aaPredicted RBP13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 SATB2Q9UPW6 733 aa13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 ANKRD34BA5PLL1 514 aa13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 MEN1O00255 615 aa13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 OR1F1O43749 312 aa13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 ETHE1O95571 254 aa13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 IL7P13232 177 aa13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 CPN2P22792 545 aa13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 LASP1Q14847 261 aaKnown RBP13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 SLC35F1Q5T1Q4 408 aa13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 ZNF367Q7RTV3 350 aa13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 ZNF461Q8TAF7 563 aa13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 ING5Q8WYH8 240 aa13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 POP5Q969H6 163 aaKnown RBP13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 PDLIM5Q96HC4 596 aaKnown RBP13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 OR51V1Q9H2C8 321 aa13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 TAC3Q9UHF0 121 aa13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 FBXW2Q9UKT8 454 aa13.7□□□□□ -0.22
CSNK1D-202ENST00000314028 TRBV4-1A0A0J9YWV2 114 aa13.69□□□□□ -0.22
CSNK1D-202ENST00000314028 C2orf92A0A1B0GVN3 265 aa13.69□□□□□ -0.22
CSNK1D-202ENST00000314028 CD8B2A6NJW9 211 aa13.69□□□□□ -0.22
CSNK1D-202ENST00000314028 HOXA2O43364 376 aa13.69□□□□□ -0.22
CSNK1D-202ENST00000314028 TOXO94900 526 aa13.69□□□□□ -0.22
CSNK1D-202ENST00000314028 CD8BP10966 210 aa13.69□□□□□ -0.22
CSNK1D-202ENST00000314028 RPS3P23396 243 aaKnown RBP eCLIP13.69□□□□□ -0.224e-6■□□□□ 9
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms