RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 CTBP2P56545 445 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 FXYD6P3P58550 94 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 RING1Q06587 406 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 IL10RBQ08334 325 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 BATFQ16520 125 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 NDUFA9Q16795 377 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 ZNF767PQ75MW2 155 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 CPNE8Q86YQ8 564 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 COX18Q8N8Q8 333 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 SCAMP5Q8TAC9 235 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 ZBED6CLQ96FA7 236 aaPredicted RBP7.88□□□□□ -1.15
VPS41-202ENST00000310301 TAPBPLQ9BX59 468 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 FKBPLQ9UIM3 349 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 SNX10Q9Y5X0 201 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 YKT6O15498 198 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 RASAL1O95294 804 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 C8GP07360 202 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 NUDT7P0C024 238 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 CDH11P55287 796 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 RELAQ04206 551 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 UBXN11Q5T124 520 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 UBE2UQ5VVX9 321 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 PNLDC1Q8NA58 520 aaKnown RBP7.88□□□□□ -1.15
VPS41-202ENST00000310301 NFKBIDQ8NI38 313 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 YIPF4Q9BSR8 244 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 CCDC106Q9BWC9 280 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 VRTNQ9H8Y1 702 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 MKKSQ9NPJ1 570 aaPredicted RBP7.88□□□□□ -1.15
VPS41-202ENST00000310301 OR2S2Q9NQN1 319 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 FZD10Q9ULW2 581 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 COL24A1Q17RW2 1714 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 SLC7A4O43246 635 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 PIM1P11309 404 aaPredicted RBP7.88□□□□□ -1.15
VPS41-202ENST00000310301 NR4A2P43354 598 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 TNFRSF4P43489 277 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 NCBP2P52298 156 aaKnown RBP eCLIP7.88□□□□□ -1.15
VPS41-202ENST00000310301 GRIN2CQ14957 1233 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 DUOXA1Q1HG43 343 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 SLC16A9Q7RTY1 509 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 SLC22A15Q8IZD6 547 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 MFSD2AQ8NA29 543 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 GRHL3Q8TE85 626 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 LGALS12Q96DT0 336 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 HMCESQ96FZ2 354 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 HYLS1Q96M11 299 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 ALPK1Q96QP1 1244 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 PHB2Q99623 299 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 SMOC2Q9H3U7 446 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 MTG2Q9H4K7 406 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 BIN3Q9NQY0 253 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 PCDHGA11Q9Y5H2 935 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 ARL5AQ9Y689 179 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 A0A1B0GVG6 124 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 FAM159BA6NKW6 160 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 C9J4A7 227 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 SSX4O60224 188 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 FAM189A1O60320 539 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 PCCBP05166 539 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 JUPP14923 745 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 FECHP22830 423 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 CSKP41240 450 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 MGAT3Q09327 533 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 RSPO2Q6UXX9 243 aaPredicted RBP7.88□□□□□ -1.15
VPS41-202ENST00000310301 TXNDC5Q8NBS9 432 aaKnown RBP7.88□□□□□ -1.15
VPS41-202ENST00000310301 SHKBP1Q8TBC3 707 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 CPNE2Q96FN4 548 aaPredicted RBP7.88□□□□□ -1.15
VPS41-202ENST00000310301 WDR26Q9H7D7 661 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 PARPBPQ9NWS1 579 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 ZNF226Q9NYT6 803 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 MOCS1Q9NZB8 636 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 NUMBLQ9Y6R0 609 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 ZNF840PA6NDX5 716 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 WASH3PC4AMC7 463 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 DLX3O60479 287 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 CDK14O94921 469 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 ESR1P03372 595 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 BCHEP06276 602 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 PET100P0DJ07 73 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 CKMT1AP12532 417 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 PTGER3P43115 390 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 LUMP51884 338 aaPredicted RBP7.88□□□□□ -1.15
VPS41-202ENST00000310301 ST3GAL4Q11206 333 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 ATP6AP1Q15904 470 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 C6orf141Q5SZD1 244 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 LIPKQ5VXJ0 399 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 CEP97Q8IW35 865 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 FAM174AQ8TBP5 190 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 TSSK6Q9BXA6 273 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 COQ4Q9Y3A0 265 aa7.88□□□□□ -1.15
VPS41-202ENST00000310301 EXOSC1Q9Y3B2 195 aaKnown RBP7.88□□□□□ -1.15
VPS41-202ENST00000310301 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.87□□□□□ -1.15
VPS41-202ENST00000310301 BORCS7-ASMTA0A0B4J1R7 106 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 GPR89AB7ZAQ6 455 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 ZNF670-ZNF695F2Z2N8 137 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 KIAA0513O60268 411 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 GPR89BP0CG08 455 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 ASPAP45381 313 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 DSG2Q14126 1118 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 ODF4Q2M2E3 257 aa7.87□□□□□ -1.15
VPS41-202ENST00000310301 KIAA0930Q6ICG6 404 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms