RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 SLC25A12O75746 678 aa15.9■□□□□ 0.14
HMGCLL1-202ENST00000308161 NEURL1O76050 574 aa15.9■□□□□ 0.14
HMGCLL1-202ENST00000308161 SP1P08047 785 aa15.9■□□□□ 0.14
HMGCLL1-202ENST00000308161 TNNI3P19429 210 aa15.9■□□□□ 0.14
HMGCLL1-202ENST00000308161 HIST1H1TP22492 207 aaPredicted RBP15.9■□□□□ 0.14
HMGCLL1-202ENST00000308161 CPN2P22792 545 aa15.9■□□□□ 0.14
HMGCLL1-202ENST00000308161 SERPINB1P30740 379 aa15.9■□□□□ 0.14
HMGCLL1-202ENST00000308161 PIK3CGP48736 1102 aa15.9■□□□□ 0.14
HMGCLL1-202ENST00000308161 CYB561P49447 251 aa15.9■□□□□ 0.14
HMGCLL1-202ENST00000308161 RPS13P62277 151 aaKnown RBP15.9■□□□□ 0.14
HMGCLL1-202ENST00000308161 PHEXP78562 749 aa15.9■□□□□ 0.14
HMGCLL1-202ENST00000308161 E2F2Q14209 437 aa15.9■□□□□ 0.14
HMGCLL1-202ENST00000308161 SLC25A25Q6KCM7 469 aa15.9■□□□□ 0.14
HMGCLL1-202ENST00000308161 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.9■□□□□ 0.14
HMGCLL1-202ENST00000308161 FAM98AQ8NCA5 519 aaKnown RBP15.9■□□□□ 0.14
HMGCLL1-202ENST00000308161 APCDD1LQ8NCL9 501 aa15.9■□□□□ 0.14
HMGCLL1-202ENST00000308161 SCMH1Q96GD3 660 aa15.9■□□□□ 0.14
HMGCLL1-202ENST00000308161 CDK15Q96Q40 435 aa15.9■□□□□ 0.14
HMGCLL1-202ENST00000308161 ALOXE3Q9BYJ1 711 aa15.9■□□□□ 0.14
HMGCLL1-202ENST00000308161 LYRM4Q9HD34 91 aa15.9■□□□□ 0.14
HMGCLL1-202ENST00000308161 DMRT3Q9NQL9 472 aa15.9■□□□□ 0.14
HMGCLL1-202ENST00000308161 RNF11Q9Y3C5 154 aa15.9■□□□□ 0.14
HMGCLL1-202ENST00000308161 CLDN16Q9Y5I7 305 aa15.9■□□□□ 0.14
HMGCLL1-202ENST00000308161 TNPO3Q9Y5L0 923 aaKnown RBP15.9■□□□□ 0.14
HMGCLL1-202ENST00000308161 DOPEY1Q5JWR5 2465 aa15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 TRGV8A0A0C4DH27 118 aa15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 CCDC189A1A4V9 331 aa15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 KLK8O60259 260 aa15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 SMIM24O75264 130 aa15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 RBP1P09455 135 aa15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 RHOXF2BP0C7M4 288 aa15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 COL8A1P27658 744 aa15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 PER3P56645 1201 aa15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 ALDH6A1Q02252 535 aaKnown RBP15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 SLAMF1Q13291 335 aa15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 PCBP2Q15366 365 aaKnown RBP eCLIP15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 TERF2Q15554 542 aa15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 ELAVL1Q15717 326 aaKnown RBP15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 DEPDC1Q5TB30 811 aa15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 LIPJQ5W064 366 aa15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 OR4C11Q6IEV9 310 aa15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 C16orf47Q6ZP98 133 aaPredicted RBP15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 IFT20Q8IY31 132 aa15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 TMEM132CQ8N3T6 1108 aa15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 TMEM156Q8N614 296 aa15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 DCAKDQ8WVC6 231 aa15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 TMEM125Q96AQ2 219 aa15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 RGMAQ96B86 450 aa15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 REPS1Q96D71 796 aa15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 RHOXF2Q9BQY4 288 aa15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 OR8D2Q9GZM6 311 aa15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 NOL11Q9H8H0 719 aaKnown RBP15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 LIN28AQ9H9Z2 209 aaKnown RBP15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 KCMF1Q9P0J7 381 aa15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 ADGRE2Q9UHX3 823 aa15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 ZNF223Q9UK11 482 aaPredicted RBP15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 PCDHGA11Q9Y5H2 935 aa15.89■□□□□ 0.13
HMGCLL1-202ENST00000308161 DIDO1Q9BTC0 2240 aaKnown RBP15.88■□□□□ 0.13
HMGCLL1-202ENST00000308161 NPIPA5E9PKD4 350 aa15.88■□□□□ 0.13
HMGCLL1-202ENST00000308161 ITGA10O75578 1167 aa15.88■□□□□ 0.13
HMGCLL1-202ENST00000308161 WISP2O76076 250 aa15.88■□□□□ 0.13
HMGCLL1-202ENST00000308161 CLDN1O95832 211 aa15.88■□□□□ 0.13
HMGCLL1-202ENST00000308161 MAGEA12P43365 314 aa15.88■□□□□ 0.13
HMGCLL1-202ENST00000308161 HLCSP50747 726 aa15.88■□□□□ 0.13
HMGCLL1-202ENST00000308161 NEK2P51955 445 aa15.88■□□□□ 0.13
HMGCLL1-202ENST00000308161 ZRSR2Q15696 482 aaKnown RBP15.88■□□□□ 0.13
HMGCLL1-202ENST00000308161 TSNAXIP1Q2TAA8 658 aa15.88■□□□□ 0.13
HMGCLL1-202ENST00000308161 MAMDC2Q7Z304 686 aaPredicted RBP15.88■□□□□ 0.13
HMGCLL1-202ENST00000308161 OR4N5Q8IXE1 308 aa15.88■□□□□ 0.13
HMGCLL1-202ENST00000308161 DAZLQ92904 295 aaKnown RBP15.88■□□□□ 0.13
HMGCLL1-202ENST00000308161 MTFMTQ96DP5 389 aaKnown RBP15.88■□□□□ 0.13
HMGCLL1-202ENST00000308161 NPIPA1Q9UND3 350 aa15.88■□□□□ 0.13
HMGCLL1-202ENST00000308161 PCDHGB6Q9Y5F9 930 aa15.88■□□□□ 0.13
HMGCLL1-202ENST00000308161 NBPF19A0A087WUL8 3843 aa15.87■□□□□ 0.13
HMGCLL1-202ENST00000308161 A0A1B0GUH1 482 aa15.87■□□□□ 0.13
HMGCLL1-202ENST00000308161 WIPF3A6NGB9 483 aa15.87■□□□□ 0.13
HMGCLL1-202ENST00000308161 C17orf105B2RV13 164 aa15.87■□□□□ 0.13
HMGCLL1-202ENST00000308161 PLPP1O14494 284 aa15.87■□□□□ 0.13
HMGCLL1-202ENST00000308161 PRKNO60260 465 aaPredicted RBP15.87■□□□□ 0.13
HMGCLL1-202ENST00000308161 ZG16O60844 167 aa15.87■□□□□ 0.13
HMGCLL1-202ENST00000308161 PRKRAO75569 313 aaKnown RBP15.87■□□□□ 0.13
HMGCLL1-202ENST00000308161 ZFAND5O76080 213 aa15.87■□□□□ 0.13
HMGCLL1-202ENST00000308161 CLDN9O95484 217 aa15.87■□□□□ 0.13
HMGCLL1-202ENST00000308161 STSP08842 583 aa15.87■□□□□ 0.13
HMGCLL1-202ENST00000308161 CNTFP26441 200 aa15.87■□□□□ 0.13
HMGCLL1-202ENST00000308161 PIK3CBP42338 1070 aa15.87■□□□□ 0.13
HMGCLL1-202ENST00000308161 CCNG1P51959 295 aa15.87■□□□□ 0.13
HMGCLL1-202ENST00000308161 RBPJQ06330 500 aa15.87■□□□□ 0.13
HMGCLL1-202ENST00000308161 PCDH1Q08174 1060 aa15.87■□□□□ 0.13
HMGCLL1-202ENST00000308161 TEX35Q5T0J7 233 aa15.87■□□□□ 0.13
HMGCLL1-202ENST00000308161 CYP4Z2PQ8N1L4 340 aa15.87■□□□□ 0.13
HMGCLL1-202ENST00000308161 CPSF7Q8N684 471 aaKnown RBP15.87■□□□□ 0.13
HMGCLL1-202ENST00000308161 OR52B6Q8NGF0 335 aa15.87■□□□□ 0.13
HMGCLL1-202ENST00000308161 OR14A16Q8NHC5 309 aa15.87■□□□□ 0.13
HMGCLL1-202ENST00000308161 ISL2Q96A47 359 aa15.87■□□□□ 0.13
HMGCLL1-202ENST00000308161 FRMD6Q96NE9 622 aa15.87■□□□□ 0.13
HMGCLL1-202ENST00000308161 NSUN5Q96P11 429 aaKnown RBP15.87■□□□□ 0.13
HMGCLL1-202ENST00000308161 ZNF180Q9UJW8 692 aa15.87■□□□□ 0.13
HMGCLL1-202ENST00000308161 ERVK-11Q9UQG0 969 aa15.87■□□□□ 0.13
HMGCLL1-202ENST00000308161 H0YIV9 168 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms