RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 KNG1P01042 644 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 OR4K17Q8NGC6 315 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 OR6N1Q8NGY5 312 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 NELL2Q99435 816 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.17□□□□□ -0.46
USP38-201ENST00000307017 SETBP1Q9Y6X0 1596 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 SRRM3A6NNA2 597 aaPredicted RBP12.17□□□□□ -0.46
USP38-201ENST00000307017 UBXN7O94888 489 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 IL7P13232 177 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 M6PRP20645 277 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 IL10RBQ08334 325 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 GK3PQ14409 553 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 GPRC6AQ5T6X5 926 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 FBXL22Q6P050 247 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 SMG8Q8ND04 991 aaKnown RBP12.17□□□□□ -0.46
USP38-201ENST00000307017 FRZBQ92765 325 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 PMS2P3Q13401 168 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 SLX4IPQ5VYV7 408 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 ZNF550Q7Z398 422 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 FRS2Q8WU20 508 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 SLC32A1Q9H598 525 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 MAB21L2Q9Y586 359 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 PTH2RP49190 550 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 BMXP51813 675 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 NDST2P52849 883 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 GINS1Q14691 196 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 IL20RBQ6UXL0 311 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 SLC36A4Q6YBV0 504 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 TMEM185AQ8NFB2 350 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 BEST4Q8NFU0 473 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 SCGB1C1Q8TD33 95 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 KLHL9Q9P2J3 617 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 SMIM35A0A1B0GVV1 85 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 WNT9AO14904 365 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 AHSA1O95433 338 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 HNRNPH3P31942 346 aaKnown RBP12.17□□□□□ -0.46
USP38-201ENST00000307017 NPRL3Q12980 569 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 ELOAQ14241 798 aaKnown RBP12.17□□□□□ -0.46
USP38-201ENST00000307017 FLYWCH1Q4VC44 716 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 PPP2R2DQ66LE6 453 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 GRASPQ7Z6J2 395 aaPredicted RBP12.17□□□□□ -0.46
USP38-201ENST00000307017 SLAMF9Q96A28 289 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 MRPL38Q96DV4 380 aaKnown RBP12.17□□□□□ -0.46
USP38-201ENST00000307017 PFDN5Q99471 154 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 POLDIP3Q9BY77 421 aaKnown RBP12.17□□□□□ -0.46
USP38-201ENST00000307017 TTYH3Q9C0H2 523 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 SLC25A18Q9H1K4 315 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 SUV39H2Q9H5I1 410 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 KCMF1Q9P0J7 381 aa12.17□□□□□ -0.46
USP38-201ENST00000307017 BAZ2AQ9UIF9 1905 aaKnown RBP12.16□□□□□ -0.46
USP38-201ENST00000307017 NPIPA5A0A0B4J1W7 369 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 NPIPA7E9PJI5 369 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 NPIPA8P0DM63 369 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 PRPS2P11908 318 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 ARSAP15289 507 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 TP53INP2Q8IXH6 220 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 LMNTD1Q8N9Z9 388 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 RIT1Q92963 219 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 NKD2Q969F2 451 aaPredicted RBP12.16□□□□□ -0.46
USP38-201ENST00000307017 OR1F2PQ96R84 312 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 SLC28A3Q9HAS3 691 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 SLITRK5O94991 958 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 ABRAXAS2Q15018 415 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 SHISA6Q6ZSJ9 500 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 ST6GALNAC5Q9BVH7 336 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 NXF5Q9H1B4 397 aaKnown RBP12.16□□□□□ -0.46
USP38-201ENST00000307017 EIF2B3Q9NR50 452 aaKnown RBP12.16□□□□□ -0.46
USP38-201ENST00000307017 NLKQ9UBE8 527 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 DIP2CQ9Y2E4 1556 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 HTR3EA5X5Y0 456 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 RAB27BO00194 218 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 USP2O75604 605 aaPredicted RBP12.16□□□□□ -0.46
USP38-201ENST00000307017 H2AFB2P0C5Z0 115 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 OXTRP30559 389 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 ETV3P41162 512 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 SLC24A5Q71RS6 500 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 PRR22Q8IZ63 422 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 TMEM156Q8N614 296 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 ZNF527Q8NB42 609 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 FBXO27Q8NI29 283 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 TSACCQ96A04 125 aaPredicted RBP12.16□□□□□ -0.46
USP38-201ENST00000307017 CCM2Q9BSQ5 444 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 MUC13Q9H3R2 512 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 MTMR10Q9NXD2 777 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 DLGAP4Q9Y2H0 992 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 OR6C75A6NL08 312 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 ZNF705GA8MUZ8 300 aaPredicted RBP12.16□□□□□ -0.46
USP38-201ENST00000307017 TMEM150CB9EJG8 249 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 STMND1H3BQB6 276 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 HSPB6O14558 160 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 SHOXO15266 292 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 POP7O75817 140 aaKnown RBP12.16□□□□□ -0.46
USP38-201ENST00000307017 MSR1P21757 451 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 CDKN2DP55273 166 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 FUT2Q10981 343 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 KCNJ11Q14654 390 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 SEC23BQ15437 767 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 NANOGP8Q6NSW7 305 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 TUBA3EQ6PEY2 450 aa12.16□□□□□ -0.46
USP38-201ENST00000307017 NANOGQ9H9S0 305 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms