RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 C9orf57Q5W0N0 161 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 CST9LP1Q5W188 147 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 NUS1Q96E22 293 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 SNX27Q96L92 541 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 GAS2L1Q99501 681 aaPredicted RBP12.93□□□□□ -0.34
TRIM56-201ENST00000306085 BTBD2Q9BX70 525 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 ABRACLQ9P1F3 81 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 OR5H15A6NDH6 313 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 OR5H14A6NHG9 310 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 A6NHS1 94 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 OR5H1A6NKK0 313 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 SC5DO75845 299 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 CSNK2A1P68400 391 aaPredicted RBP12.93□□□□□ -0.34
TRIM56-201ENST00000306085 ANKRD54Q6NXT1 300 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 TMEM205Q6UW68 189 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 CSNK2A3Q8NEV1 391 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 KCNJ9Q92806 393 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 MRPL38Q96DV4 380 aaKnown RBP12.93□□□□□ -0.34
TRIM56-201ENST00000306085 KCNJ16Q9NPI9 418 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 DFNA5O60443 496 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 POU3F4P49335 361 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 PAN3Q58A45 887 aaKnown RBP12.93□□□□□ -0.34
TRIM56-201ENST00000306085 PRAMEF19Q5SWL8 479 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 C22orf42Q6IC83 251 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 OR52W1Q6IF63 320 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 OR2AP1Q8NGE2 309 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 OR5B17Q8NGF7 314 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 GTF2H4Q92759 462 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 COQ10AQ96MF6 247 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 RAB11FIP5Q9BXF6 653 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 LRRC42Q9Y546 428 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 KNG1P01042 644 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 ADRB3P13945 408 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 TAS2R20P59543 309 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 OR4K3Q96R72 315 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 POP4O95707 220 aaKnown RBP12.93□□□□□ -0.34
TRIM56-201ENST00000306085 THBS2P35442 1172 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 OR1S1Q8NH92 325 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 DEDD2Q8WXF8 326 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 ZNF559Q9BR84 538 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 PELOQ9BRX2 385 aaKnown RBP12.93□□□□□ -0.34
TRIM56-201ENST00000306085 ZNF638Q14966 1978 aaKnown RBP12.93□□□□□ -0.34
TRIM56-201ENST00000306085 B4GAT1O43505 415 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 ARHGEF15O94989 841 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 WDR53Q7Z5U6 358 aaPredicted RBP12.93□□□□□ -0.34
TRIM56-201ENST00000306085 LINC00471Q8N535 108 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 SETD7Q8WTS6 366 aaKnown RBP12.93□□□□□ -0.34
TRIM56-201ENST00000306085 CANT1Q8WVQ1 401 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 ASB9Q96DX5 294 aa12.93□□□□□ -0.34
TRIM56-201ENST00000306085 MMABQ96EY8 250 aaPredicted RBP12.93□□□□□ -0.34
TRIM56-201ENST00000306085 URM1Q9BTM9 101 aaKnown RBP12.93□□□□□ -0.34
TRIM56-201ENST00000306085 MYEF2Q9P2K5 600 aaKnown RBP12.93□□□□□ -0.34
TRIM56-201ENST00000306085 SEC14L6B5MCN3 397 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 CKMT2P17540 419 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 CELP19835 753 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 ST3GAL3Q11203 375 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 FAM173AQ9BQD7 235 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 TPPP3Q9BW30 176 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 ZDHHC4Q9NPG8 344 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 PCDHGC4Q9Y5F7 938 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 PI15O43692 258 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 CERS1P27544 350 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 ESAMQ96AP7 390 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 PGAM5Q96HS1 289 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 PTPRRQ15256 657 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 RAB11BQ15907 218 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 ASRGL1Q7L266 308 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 GPR155Q7Z3F1 870 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 FAM122AQ96E09 287 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 PTGES2Q9H7Z7 377 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 STUB1Q9UNE7 303 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 MAP3K4Q9Y6R4 1608 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 C20orf202A1L168 122 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 CCDC85CA6NKD9 419 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 ELK4P28324 431 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 ACVR1BP36896 505 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 ARL16Q0P5N6 197 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 DHCR24Q15392 516 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 DUOXA1Q1HG43 343 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 CARM1Q86X55 608 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 ZNF610Q8N9Z0 462 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 PYURFQ96I23 114 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 RPL10LQ96L21 214 aaKnown RBP12.92□□□□□ -0.34
TRIM56-201ENST00000306085 Q9N2J8 555 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 TMX2Q9Y320 296 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 CBY3A6NI87 242 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 TFP02787 698 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 RNF130Q86XS8 419 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 MROQ9BYG7 248 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 PRDM9Q9NQV7 894 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 SLC1A7O00341 560 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 ABCB7O75027 752 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 AMY2AP04746 511 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 CREB3L2Q70SY1 520 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 ZNF695Q8IW36 515 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 PDCD2LQ9BRP1 358 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 OSBPL7Q9BZF2 842 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 ZNF395Q9H8N7 513 aaPredicted RBP12.92□□□□□ -0.34
TRIM56-201ENST00000306085 C9orf131Q5VYM1 1079 aa12.92□□□□□ -0.34
TRIM56-201ENST00000306085 SLX4IPQ5VYV7 408 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms