RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 OR8U9P0C7N5 309 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 IFNGR1P15260 489 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 SDHBP21912 280 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 CPT2P23786 658 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 STT3AP46977 705 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 BTN1A1Q13410 526 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 BOP1Q14137 746 aaKnown RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 REP15Q6BDI9 236 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 SLC27A4Q6P1M0 643 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ETV3LQ6ZN32 361 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 GPR142Q7Z601 462 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 MTIF3Q9H2K0 278 aaKnown RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 TOR3AQ9H497 397 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ZCCHC4Q9H5U6 513 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 OSGEPQ9NPF4 335 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 FAM53CQ9NYF3 392 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 PCTPQ9UKL6 214 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 IGSF1Q8N6C5 1336 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 SLC22A31A6NKX4 558 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 C19orf81C9J6K1 198 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 LY86O95711 162 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ADRA2BP18089 450 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 RHCEP18577 417 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 PTPN9P43378 593 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 SLC39A12Q504Y0 691 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 PXDC1Q5TGL8 231 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 MAP1SQ66K74 1059 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 OR2A12Q8NGT7 310 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 SLC5A5Q92911 643 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 TMEM74Q96NL1 305 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 VRTNQ9H8Y1 702 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 QTRT2Q9H974 415 aaKnown RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 HEG1Q9ULI3 1381 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 GTPBP1O00178 669 aaKnown RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 LILRB5O75023 590 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 NSA2O95478 260 aaKnown RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF823P16415 610 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ELK1P19419 428 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 MGAT1P26572 445 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 AVPR1AP37288 418 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 FRKP42685 505 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 PLA2G16P53816 162 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ARHGAP19Q14CB8 494 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 NTRK2Q16620 822 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ARL13AQ5H913 290 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 RELL2Q8NC24 303 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 LPGAT1Q92604 370 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 GGHQ92820 318 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 PIWIL1Q96J94 861 aaKnown RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 CNPPD1Q9BV87 410 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 PIF1Q9H611 641 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 CWH43Q9H720 699 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 EGFL7Q9UHF1 273 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 NUP210Q8TEM1 1887 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF608Q9ULD9 1512 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 CLDN24A6NM45 220 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF487B1APH4 448 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 H3BSA7 217 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ARHGAP33O14559 1287 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 CSTBP04080 98 aaKnown RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 CKMP06732 381 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 RXRBP28702 533 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 CLCN7P51798 805 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 SLC6A3Q01959 620 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ST3GAL3Q11203 375 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 PARP15Q460N3 678 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 CAPN13Q6MZZ7 669 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 TIFABQ6ZNK6 161 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 CLDN22Q8N7P3 220 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF321PQ8N8H1 164 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 SPATA20Q8TB22 786 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 HS6ST2Q96MM7 605 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 NXF2Q9GZY0 626 aaKnown RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 MCCC2Q9HCC0 563 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ATP13A2Q9NQ11 1180 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 RLIMQ9NVW2 624 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ADAM29Q9UKF5 820 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 PRKAB1Q9Y478 270 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 KPTNQ9Y664 436 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 U3KQV3 271 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 SPATA31D1Q6ZQQ2 1576 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 COL15A1P39059 1388 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 XRN1Q8IZH2 1706 aaKnown RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 C2orf16Q68DN1 1984 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 IRF6O14896 467 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 OR10H2O60403 315 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 BCAS1O75363 584 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 JCHAINP01591 159 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 SHBGP04278 402 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF20P17024 532 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 HNF1AP20823 631 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 TAS2R46P59540 309 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 TAS2R19P59542 299 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 SNRPD1P62314 119 aaKnown RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 PPIGQ13427 754 aaKnown RBP eCLIP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 SPHARQ15513 63 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 FUNDC1Q8IVP5 155 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ZDHHC4Q9NPG8 344 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 PCDHGA2Q9Y5H1 932 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 PCDHA2Q9Y5H9 948 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms