RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 ADNP2Q6IQ32 1131 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 OR5AR1Q8NGP9 310 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 CNDP2Q96KP4 475 aaKnown RBP16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 CHCHD6Q9BRQ6 235 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 DKK3Q9UBP4 350 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 URB1O60287 2271 aaKnown RBP16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 ZCWPW2A0A1B0GU75 182 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 FGL2Q14314 439 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 PERM1Q5SV97 790 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 KIAA0895LQ68EN5 471 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 RAB43Q86YS6 212 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 LNX2Q8N448 690 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 C11orf24Q96F05 449 aaPredicted RBP16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 WBP1LQ9NX94 342 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 SRPK3Q9UPE1 567 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 BCAT2O15382 392 aaPredicted RBP16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 OR12D1P0DN82 309 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 PKDCCQ504Y2 493 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 SEC14L1Q92503 715 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 ACTR10Q9NZ32 417 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 WASF2Q9Y6W5 498 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 GPR37L1O60883 481 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 OR4D1Q15615 310 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 ATG9BQ674R7 924 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 SLCO6A1Q86UG4 719 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 TNFRSF10DQ9UBN6 386 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 MAP3K8P41279 467 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 GRIK2Q13002 908 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 SERTAD2Q14140 314 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 SIX1Q15475 284 aaPredicted RBP16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 P2RY8Q86VZ1 359 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 PACRGLQ8N7B6 248 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 C9orf43Q8TAL5 461 aaPredicted RBP16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 FUBP1Q96AE4 644 aaKnown RBP16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 BHLHE41Q9C0J9 482 aaPredicted RBP16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 POLR2J2Q9GZM3 115 aaKnown RBP16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 KCNK13Q9HB14 408 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 TBX21Q9UL17 535 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 GON4LQ3T8J9 2241 aa16.97■□□□□ 0.31
CDC42EP3-201ENST00000295324 A0A0J9YY10 115 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 LOC110117498-PIK3R3F6TDL0 507 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 RTCAO00442 366 aaKnown RBP16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 SHC2P98077 582 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 NFATC4Q14934 902 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 ABRAXAS2Q15018 415 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 CRTC2Q53ET0 693 aaPredicted RBP16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 PNLDC1Q8NA58 520 aaKnown RBP16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 OR8J3Q8NGG0 315 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 TIMM29Q9BSF4 260 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 C1orf21Q9H246 121 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 ASB6Q9NWX5 421 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 ZNF222Q9UK12 451 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 SDHDO14521 159 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 P04436 131 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 YPEL5P62699 121 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 PLP2Q04941 152 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 PAMR1Q6UXH9 720 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 TMBIM1Q969X1 311 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 COMMD3-BMI1R4GMX3 469 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 AIREO43918 545 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 PRSS56P0CW18 603 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 GSTM2P28161 218 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 RTN4RL1Q86UN2 441 aaPredicted RBP16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 TSSK6Q9BXA6 273 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 EBF2Q9HAK2 575 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 BRD7Q9NPI1 651 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 OR52A4PA6NMU1 304 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 ZNF821O75541 412 aaPredicted RBP16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 CD63P08962 238 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 PGCP20142 388 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 IL4RP24394 825 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 TXNL4AP83876 142 aaKnown RBP16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 SLC5A9Q2M3M2 681 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 LRRC69Q6ZNQ3 347 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 PJA1Q8NG27 643 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 DGCR14Q96DF8 476 aaKnown RBP16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 IL4I1Q96RQ9 567 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 TBX5Q99593 518 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 HS3ST2Q9Y278 367 aa16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 DDX60Q8IY21 1712 aaKnown RBP16.96■□□□□ 0.31
CDC42EP3-201ENST00000295324 ZNF670-ZNF695F2Z2N8 137 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 ARF5P84085 180 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 MC1RQ01726 317 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 DEFB110Q30KQ9 67 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 LINC01465Q8N7H1 131 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 AQP11Q8NBQ7 271 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 ACOT7O00154 380 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 SIM1P81133 766 aaPredicted RBP16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 PMS2P3Q13401 168 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 ARHGAP19Q14CB8 494 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 ABHD17BQ5VST6 288 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 GRHL2Q6ISB3 625 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 FAM86B1Q8N7N1 296 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 BIRC7Q96CA5 298 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 GORASP1Q9BQQ3 440 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 KLHL42Q9P2K6 505 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 PRSS38A1L453 326 aa16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 RPS3AP61247 264 aaKnown RBP16.95■□□□□ 0.3
CDC42EP3-201ENST00000295324 IL18Q14116 193 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms