RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 IDNKQ5T6J7 187 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 LYSMD4Q5XG99 296 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 ZNF101Q8IZC7 436 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 SLC12A9Q9BXP2 914 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 TM9SF3Q9HD45 589 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 AK1P00568 194 aa17.77■□□□□ 0.44
PCDH1-201ENST00000287008 C8BP07358 591 aa17.77■□□□□ 0.44
PCDH1-201ENST00000287008 RIN1Q13671 783 aa17.77■□□□□ 0.44
PCDH1-201ENST00000287008 ATG9BQ674R7 924 aa17.77■□□□□ 0.44
PCDH1-201ENST00000287008 NANOGP8Q6NSW7 305 aa17.77■□□□□ 0.44
PCDH1-201ENST00000287008 OR52B6Q8NGF0 335 aa17.77■□□□□ 0.44
PCDH1-201ENST00000287008 RAB2BQ8WUD1 216 aa17.77■□□□□ 0.44
PCDH1-201ENST00000287008 OSTF1Q92882 214 aa17.77■□□□□ 0.44
PCDH1-201ENST00000287008 RTP4Q96DX8 246 aa17.77■□□□□ 0.44
PCDH1-201ENST00000287008 NANOGQ9H9S0 305 aa17.77■□□□□ 0.44
PCDH1-201ENST00000287008 GALK1P51570 392 aa17.77■□□□□ 0.44
PCDH1-201ENST00000287008 SIM1P81133 766 aaPredicted RBP17.77■□□□□ 0.44
PCDH1-201ENST00000287008 LRP8Q14114 963 aa17.77■□□□□ 0.44
PCDH1-201ENST00000287008 ANKFN1Q8N957 763 aa17.77■□□□□ 0.44
PCDH1-201ENST00000287008 OR2L3Q8NG85 312 aa17.77■□□□□ 0.44
PCDH1-201ENST00000287008 PHF12Q96QT6 1004 aa17.77■□□□□ 0.44
PCDH1-201ENST00000287008 TM9SF2Q99805 663 aa17.77■□□□□ 0.44
PCDH1-201ENST00000287008 POLDIP3Q9BY77 421 aaKnown RBP17.77■□□□□ 0.44
PCDH1-201ENST00000287008 CST11Q9H112 138 aa17.77■□□□□ 0.44
PCDH1-201ENST00000287008 TRIM36Q9NQ86 728 aa17.77■□□□□ 0.44
PCDH1-201ENST00000287008 ACTL7AQ9Y615 435 aa17.77■□□□□ 0.44
PCDH1-201ENST00000287008 DRGXA6NNA5 263 aa17.77■□□□□ 0.43
PCDH1-201ENST00000287008 TBX10O75333 385 aa17.77■□□□□ 0.43
PCDH1-201ENST00000287008 ITGA3P26006 1051 aa17.77■□□□□ 0.43
PCDH1-201ENST00000287008 NUDT6P53370 316 aa17.77■□□□□ 0.43
PCDH1-201ENST00000287008 VBP1P61758 197 aa17.77■□□□□ 0.43
PCDH1-201ENST00000287008 ARF5P84085 180 aa17.77■□□□□ 0.43
PCDH1-201ENST00000287008 CARM1Q86X55 608 aa17.77■□□□□ 0.43
PCDH1-201ENST00000287008 PEX11GQ96HA9 241 aa17.77■□□□□ 0.43
PCDH1-201ENST00000287008 B3GNT4Q9C0J1 378 aa17.77■□□□□ 0.43
PCDH1-201ENST00000287008 ZNF576Q9H609 170 aa17.77■□□□□ 0.43
PCDH1-201ENST00000287008 TIGARQ9NQ88 270 aa17.77■□□□□ 0.43
PCDH1-201ENST00000287008 COMMD3Q9UBI1 195 aa17.77■□□□□ 0.43
PCDH1-201ENST00000287008 VILLO15195 856 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 TBX1O43435 398 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 ITGBL1O95965 494 aaPredicted RBP17.76■□□□□ 0.43
PCDH1-201ENST00000287008 SLC15A1P46059 708 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 GPALPP1Q8IXQ4 340 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 CLIP4Q8N3C7 705 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 STON2Q8WXE9 905 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 USP3Q9Y6I4 520 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 MYOCOSA0A1B0GUC4 107 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 SOCS7O14512 581 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 VMACQ2NL98 169 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 C6orf120Q7Z4R8 191 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 IQCF2Q8IXL9 164 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 HEBP1Q9NRV9 189 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 MYH1P12882 1939 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 HIDE1A8MVS5 230 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 CYP17A1P05093 508 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 EDN1P05305 212 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 HK1P19367 917 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 OR8J3Q8NGG0 315 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 RLN3Q8WXF3 142 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 HSPA12BQ96MM6 686 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 RNF38Q9H0F5 515 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 ZBTB20Q9HC78 741 aaPredicted RBP17.76■□□□□ 0.43
PCDH1-201ENST00000287008 UPB1Q9UBR1 384 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 GRIP1Q9Y3R0 1128 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 AHCYL1O43865 530 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 CD36P16671 472 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 SLC6A4P31645 630 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 OTX2P32243 289 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 CD68P34810 354 aaPredicted RBP17.76■□□□□ 0.43
PCDH1-201ENST00000287008 P2RY2P41231 377 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 FCHO2Q0JRZ9 810 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 GRB7Q14451 532 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 ABRAXAS2Q15018 415 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 SLC35F1Q5T1Q4 408 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 KRTCAP2Q8N6L1 136 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 DHRS1Q96LJ7 313 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 KCTD7Q96MP8 289 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 MKS1Q9NXB0 559 aa17.76■□□□□ 0.43
PCDH1-201ENST00000287008 ZNF879B4DU55 563 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 PGGT1BP53609 377 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 SHC2P98077 582 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 GRIK2Q13002 908 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 GRIN2CQ14957 1233 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 DEFB110Q30KQ9 67 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 OR4C11Q6IEV9 310 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 LIPIQ6XZB0 460 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 CDHR3Q6ZTQ4 885 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 ERMP1Q7Z2K6 904 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 SDR16C5Q8N3Y7 309 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 RHCGQ9UBD6 479 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 PCDHGB2Q9Y5G2 931 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 KDM3BQ7LBC6 1761 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 WASH4PA8MWX3 477 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 BCAS2O75934 225 aaPredicted RBP17.75■□□□□ 0.43
PCDH1-201ENST00000287008 CBLP22681 906 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 GJA4P35212 333 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 C1orf94Q6P1W5 598 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 JAGN1Q8N5M9 183 aa17.75■□□□□ 0.43
PCDH1-201ENST00000287008 ZSCAN4Q8NAM6 433 aaPredicted RBP17.75■□□□□ 0.43
PCDH1-201ENST00000287008 PGAP2Q9UHJ9 254 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms