RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 ZNF860A6NHJ4 632 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 MAGEB17A8MXT2 336 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 H0YIG0 161 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 SLC22A2O15244 555 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 WIPF1O43516 503 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 GALR3O60755 368 aaPredicted RBP10.93□□□□□ -0.66
PFDN1-201ENST00000261813 DNAJB6O75190 326 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 SH3BGRLO75368 114 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 RDH16O75452 317 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 KLF7O75840 302 aaPredicted RBP10.93□□□□□ -0.66
PFDN1-201ENST00000261813 RSL1D1O76021 490 aaKnown RBP10.93□□□□□ -0.66
PFDN1-201ENST00000261813 MYO1DO94832 1006 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 TGFB1P01137 390 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 PDYNP01213 254 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 LINC00032P0C843 101 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 PIM1P11309 404 aaPredicted RBP10.93□□□□□ -0.66
PFDN1-201ENST00000261813 ACPPP15309 386 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 FBLP22087 321 aaKnown RBP10.93□□□□□ -0.66
PFDN1-201ENST00000261813 PTX3P26022 381 aaPredicted RBP10.93□□□□□ -0.66
PFDN1-201ENST00000261813 MAPK1P28482 360 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 PTPN4P29074 926 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 EPHA3P29320 983 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 AVPR1BP47901 424 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 NEK2P51955 445 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 STXBP1P61764 594 aaKnown RBP10.93□□□□□ -0.66
PFDN1-201ENST00000261813 RPS13P62277 151 aaKnown RBP10.93□□□□□ -0.66
PFDN1-201ENST00000261813 RPS15P62841 145 aaKnown RBP10.93□□□□□ -0.66
PFDN1-201ENST00000261813 MAT1AQ00266 395 aaKnown RBP10.93□□□□□ -0.66
PFDN1-201ENST00000261813 ABRAXAS2Q15018 415 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 HERC3Q15034 1050 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 LSM12Q3MHD2 195 aaKnown RBP10.93□□□□□ -0.66
PFDN1-201ENST00000261813 DEFB134Q4QY38 66 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 SLC9B1Q4ZJI4 515 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 XKR7Q5GH72 579 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 TCHHL1Q5QJ38 904 aaPredicted RBP10.93□□□□□ -0.66
PFDN1-201ENST00000261813 BROXQ5VW32 411 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 OGFOD2Q6N063 350 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 LARP4Q71RC2 724 aaKnown RBP eCLIP10.93□□□□□ -0.66
PFDN1-201ENST00000261813 ABHD13Q7L211 337 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 OVCH1Q7RTY7 1134 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 MAVSQ7Z434 540 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 OR5T3Q8NGG3 340 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 STARD8Q92502 1023 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 FKBP10Q96AY3 582 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 CRELD1Q96HD1 420 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 SLC45A3Q96JT2 553 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 F2RL3Q96RI0 385 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 MTERF1Q99551 399 aaKnown RBP10.93□□□□□ -0.66
PFDN1-201ENST00000261813 SERPINI1Q99574 410 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 C17orf62Q9BQA9 187 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 EFHD1Q9BUP0 239 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 GPR87Q9BY21 358 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 REXO4Q9GZR2 422 aaKnown RBP10.93□□□□□ -0.66
PFDN1-201ENST00000261813 OR51B5Q9H339 312 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 TUBB1Q9H4B7 451 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 ACTL8Q9H568 366 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 WDR55Q9H6Y2 383 aaPredicted RBP10.93□□□□□ -0.66
PFDN1-201ENST00000261813 AKTIPQ9H8T0 292 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 FARSBQ9NSD9 589 aaKnown RBP10.93□□□□□ -0.66
PFDN1-201ENST00000261813 TMEM45AQ9NWC5 275 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 VPS29Q9UBQ0 182 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 GPN3Q9UHW5 284 aaPredicted RBP10.93□□□□□ -0.66
PFDN1-201ENST00000261813 KCND3Q9UK17 655 aa10.93□□□□□ -0.66
PFDN1-201ENST00000261813 AHCTF1Q8WYP5 2266 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 IGLV3-12A0A075B6K2 115 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 VSTM2BA6NLU5 285 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 UBDO15205 165 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 ERI3O43414 337 aaKnown RBP10.92□□□□□ -0.66
PFDN1-201ENST00000261813 ETHE1O95571 254 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 ALBP02768 609 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 HTR6P50406 440 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 ATP4BP51164 291 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 ARFIP1P53367 373 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 TMPRSS3P57727 454 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 STX1BP61266 288 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 ERVK-8P63133 956 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 OLR1P78380 273 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 EMX2Q04743 252 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 CUL3Q13618 768 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 IL10RAQ13651 578 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 RPS6KA2Q15349 733 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 NKG7Q16617 165 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 GSTA3Q16772 222 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 SGO1Q5FBB7 561 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 DEPDC1Q5TB30 811 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 VWA5B1Q5TIE3 1220 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 KHDRBS2Q5VWX1 349 aaKnown RBP10.92□□□□□ -0.66
PFDN1-201ENST00000261813 ABHD17CQ6PCB6 329 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 CCDC81Q6ZN84 652 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 CHSY3Q70JA7 882 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 TRPM8Q7Z2W7 1104 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 UBE3DQ7Z6J8 389 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 SRFBP1Q8NEF9 429 aaKnown RBP10.92□□□□□ -0.66
PFDN1-201ENST00000261813 OR2L5Q8NG80 312 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 MTFMTQ96DP5 389 aaKnown RBP10.92□□□□□ -0.66
PFDN1-201ENST00000261813 CMTM7Q96FZ5 175 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 QRFPRQ96P65 431 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 EBF4Q9BQW3 602 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 SLC26A1Q9H2B4 701 aa10.92□□□□□ -0.66
PFDN1-201ENST00000261813 C1orf109Q9NX04 203 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms