RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 MPPE1Q53F39 396 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 TNFAIP8L2Q6P589 184 aaPredicted RBP15.19■□□□□ 0.02
LMNB1-201ENST00000261366 C19orf48Q6RUI8 117 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 CRTC1Q6UUV9 634 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 HUS1BQ8NHY5 278 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 SCAMP4Q969E2 229 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 MTERF3Q96E29 417 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 MAP6Q96JE9 813 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 SLC22A12Q96S37 553 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 GDF15Q99988 308 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 TTLL2Q9BWV7 592 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 BRD9Q9H8M2 597 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 TXNL4BQ9NX01 149 aaKnown RBP15.19■□□□□ 0.02
LMNB1-201ENST00000261366 RNF186Q9NXI6 227 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 CLEC4EQ9ULY5 219 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 MKI67P46013 3256 aaKnown RBP15.19■□□□□ 0.02
LMNB1-201ENST00000261366 ZAR1LA6NP61 321 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 TGFB1P01137 390 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 OR56A5P0C7T3 313 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 PBLDP30039 288 aaPredicted RBP15.19■□□□□ 0.02
LMNB1-201ENST00000261366 CSTF2P33240 577 aaKnown RBP eCLIP15.19■□□□□ 0.02
LMNB1-201ENST00000261366 BDKRB1P46663 353 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 PTPN5P54829 565 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 SMAD3P84022 425 aaKnown RBP15.19■□□□□ 0.02
LMNB1-201ENST00000261366 ZNF91Q05481 1191 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 GPR17Q13304 367 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 P2RY14Q15391 338 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 SEC23BQ15437 767 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 SLC35F1Q5T1Q4 408 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 TYW3Q6IPR3 259 aaKnown RBP15.19■□□□□ 0.02
LMNB1-201ENST00000261366 RNF165Q6ZSG1 346 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 MSANTD1Q6ZTZ1 278 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 PHC2Q8IXK0 858 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 HCAR2Q8TDS4 363 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 TMEM80Q96HE8 168 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 RACGAP1Q9H0H5 632 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 OR51B5Q9H339 312 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 TRBV5-4A0A0C4DH59 114 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 LOC102723532A0A0G2JNH3 316 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 ARHGEF9O43307 516 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 OR3A3P47888 321 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 LIM2P55344 173 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 LSM11P83369 360 aaKnown RBP eCLIP15.18■□□□□ 0.025e-7■■■■□ 20.7
LMNB1-201ENST00000261366 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.18■□□□□ 0.022e-7■□□□□ 9.8
LMNB1-201ENST00000261366 GGTA1PQ4G0N0 100 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 CASP12Q6UXS9 341 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 TMPRSS11BQ86T26 416 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 PDZD3Q86UT5 571 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 NELL2Q99435 816 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 HDHD5Q9BXW7 423 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 FAM83DQ9H4H8 585 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 MCUBQ9NWR8 336 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 ZDHHC3Q9NYG2 299 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 SEC14L4Q9UDX3 406 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 TMCC3Q9ULS5 477 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 EXO1Q9UQ84 846 aaKnown RBP15.18■□□□□ 0.02
LMNB1-201ENST00000261366 PSIP1O75475 530 aaKnown RBP15.18■□□□□ 0.02
LMNB1-201ENST00000261366 IFNW1P05000 195 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 XCR1P46094 333 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 TRIQKQ629K1 86 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 B3GLCTQ6Y288 498 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 OLIG3Q7RTU3 272 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 SZRD1Q7Z422 152 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 TIGD4Q8IY51 512 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 C19orf18Q8NEA5 215 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 GATAD2BQ8WXI9 593 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 LINC01599Q8WXQ3 324 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 RAB8BQ92930 207 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 SLC6A18Q96N87 628 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 SORBS1Q9BX66 1292 aaKnown RBP15.18■□□□□ 0.02
LMNB1-201ENST00000261366 TMPRSS11EQ9UL52 423 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 FFAR1O14842 300 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 MSL3P1P0C860 447 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 OR1D2P34982 312 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 TM4SF4P48230 202 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 GPR19Q15760 415 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 GLYR1Q49A26 553 aaPredicted RBP15.18■□□□□ 0.02
LMNB1-201ENST00000261366 CRTC2Q53ET0 693 aaPredicted RBP15.18■□□□□ 0.02
LMNB1-201ENST00000261366 CCSAPQ6IQ19 270 aaPredicted RBP15.18■□□□□ 0.02
LMNB1-201ENST00000261366 CCDC149Q6ZUS6 474 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 AMIGO1Q86WK6 493 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 WDR20Q8TBZ3 569 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 CREB3L4Q8TEY5 395 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 GEMIN6Q8WXD5 167 aaKnown RBP15.18■□□□□ 0.02
LMNB1-201ENST00000261366 MYLIPQ8WY64 445 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 RIPOR3Q96MK2 946 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 MAPKAP1Q9BPZ7 522 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 WFDC6Q9BQY6 131 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 GALNT9Q9HCQ5 603 aa15.18■□□□□ 0.02
LMNB1-201ENST00000261366 CNOT2Q9NZN8 540 aaKnown RBP15.18■□□□□ 0.02
LMNB1-201ENST00000261366 ZNF282Q9UDV7 671 aaPredicted RBP15.18■□□□□ 0.02
LMNB1-201ENST00000261366 VWA8A3KMH1 1905 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 CKAP5Q14008 2032 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 FAM240BA0A1B0GVZ2 78 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 HYKKA2RU49 373 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 OR2B3O76000 313 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 SLC2A2P11168 524 aaPredicted RBP15.17■□□□□ 0.02
LMNB1-201ENST00000261366 LHCGRP22888 699 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 PRPH2P23942 346 aa15.17■□□□□ 0.02
LMNB1-201ENST00000261366 RPS5P46782 204 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms