RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 REP15Q6BDI9 236 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 CYB5D1Q6P9G0 228 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 CCNJLQ8IV13 435 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 MINDY1Q8N5J2 469 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 OR5D16Q8NGK9 328 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 SAP130Q9H0E3 1048 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 FKBP14Q9NWM8 211 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 NDOR1Q9UHB4 597 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 POMT2Q9UKY4 750 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 RUVBL1Q9Y265 456 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 AP3M1Q9Y2T2 418 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 ETV2O00321 342 aaPredicted RBP5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 VILLO15195 856 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 OLR1P78380 273 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 MRPS35P82673 323 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 MRPS21P82921 87 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 HOXA4Q00056 320 aaPredicted RBP5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 INSM1Q01101 510 aaPredicted RBP5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 SF3A2Q15428 464 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 SKIV2LQ15477 1246 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 NOXRED1Q6NXP6 359 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 CASC4Q6P4E1 433 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 CRTC3Q6UUV7 619 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 CBLN3Q6UW01 205 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 LANCL3Q6ZV70 420 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 MRGPREQ86SM8 312 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 CARM1Q86X55 608 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 TESCQ96BS2 214 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 TXLNGQ9NUQ3 528 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 TBC1D14Q9P2M4 693 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 MSRAQ9UJ68 235 aa5.27□□□□□ -1.57
TOPBP1-201ENST00000260810 CFAP99D6REC4 459 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 M0R129 80 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 KRT38O76015 456 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 BMP10O95393 424 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 FOSL2P15408 326 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 UGT2B7P16662 529 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 CKMT2P17540 419 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 IL1RNP18510 177 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 TYK2P29597 1187 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 RPS13P62277 151 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 TGM3Q08188 693 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 DEFB110Q30KQ9 67 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 FAM45BPQ6NSW5 357 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 FAM45AQ8TCE6 357 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 CANT1Q8WVQ1 401 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 ZUFSPQ96AP4 578 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 ELMO2Q96JJ3 720 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 VSTM2LQ96N03 204 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 GFI1Q99684 422 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 MAP3K3Q99759 626 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 NIPSNAP1Q9BPW8 284 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 DEPPQ9NTK1 212 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 FOXJ2Q9P0K8 574 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 RRP15Q9Y3B9 282 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 LOC100653049A0A140TA62 436 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 DCTN6O00399 190 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 SLC16A5O15375 505 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 GLRA3O75311 464 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 KRT34O76011 436 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 KRT37O76014 449 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 TFPIP10646 304 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 ACP5P13686 325 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 ZNF17P17021 662 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 ME2P23368 584 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 SERPINB9P50453 376 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 CSRP2Q16527 193 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 CYP20A1Q6UW02 462 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 BCDIN3DQ7Z5W3 292 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 TMCO5AQ8N6Q1 288 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 OR4C3Q8NH37 302 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 ZNF721Q8TF20 911 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 SNX19Q92543 992 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 GFM2Q969S9 779 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 NMD3Q96D46 503 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 FRMD6Q96NE9 622 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 ZSCAN5AQ9BUG6 496 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 VTI1BQ9UEU0 232 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 PCDHGA11Q9Y5H2 935 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 SPACA6W5XKT8 324 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 AKAP6Q13023 2319 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 A0A1B0GVT2 93 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 A0A1B0GW55 424 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 OR6B1O95007 311 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 ATP6V1G2O95670 118 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 DUX4L2P0CJ85 424 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 DUX4L3P0CJ86 424 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 DUX4L4P0CJ87 422 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 DUX4L5P0CJ88 424 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 DUX4L6P0CJ89 424 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 DUX4L7P0CJ90 424 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 MAPK9P45984 424 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 ITKQ08881 620 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 TNK1Q13470 666 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 NAB1Q13506 487 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 SMN1Q16637 294 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 ICE2Q659A1 982 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 BICRALQ6AI39 1079 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 LINGO2Q7L985 606 aa5.26□□□□□ -1.57
TOPBP1-201ENST00000260810 CHST15Q7LFX5 561 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms