RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 MAP4K2Q12851 820 aa12.64□□□□□ -0.39
PGBD1-201ENST00000259883 DDX53Q86TM3 631 aaKnown RBP12.64□□□□□ -0.39
PGBD1-201ENST00000259883 OR5D16Q8NGK9 328 aa12.64□□□□□ -0.39
PGBD1-201ENST00000259883 XAGE5Q8WWM1 108 aa12.64□□□□□ -0.39
PGBD1-201ENST00000259883 GABARAPL3Q9BY60 117 aa12.64□□□□□ -0.39
PGBD1-201ENST00000259883 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.63□□□□□ -0.39
PGBD1-201ENST00000259883 NCR1O76036 304 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 PTTG1O95997 202 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 CRISP1P54107 249 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 VEZF1Q14119 521 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 INSL4Q14641 139 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 FRMPD2BQ6IN97 320 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 MED27Q6P2C8 311 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 CASP12Q6UXS9 341 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.63□□□□□ -0.39
PGBD1-201ENST00000259883 NLGN4YQ8NFZ3 816 aaPredicted RBP12.63□□□□□ -0.39
PGBD1-201ENST00000259883 RAET1EQ8TD07 263 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 ARSGQ96EG1 525 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 OR2AG1Q9H205 316 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 TMCC3Q9ULS5 477 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 SPIN1Q9Y657 262 aaPredicted RBP12.63□□□□□ -0.39
PGBD1-201ENST00000259883 COL4A4P53420 1690 aaPredicted RBP12.63□□□□□ -0.39
PGBD1-201ENST00000259883 FEZF1A0PJY2 475 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 ISPDA4D126 451 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 K7ESM1 405 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 CCL16O15467 120 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 PRKRAO75569 313 aaKnown RBP12.63□□□□□ -0.39
PGBD1-201ENST00000259883 CBSLP0DN79 551 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 PSMA3P25788 255 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 PCGF2P35227 344 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 CBSP35520 551 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 HNRNPFP52597 415 aaKnown RBP12.63□□□□□ -0.39
PGBD1-201ENST00000259883 FAM26DQ5JW98 314 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 USP30Q70CQ3 517 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 DOK4Q8TEW6 326 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 ZNF480Q8WV37 535 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 IGSF21Q96ID5 467 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 OPALINQ96PE5 141 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 SIGLEC11Q96RL6 698 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 PIP5K1AQ99755 562 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 SLC6A16Q9GZN6 736 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 QRSL1Q9H0R6 528 aaKnown RBP12.63□□□□□ -0.39
PGBD1-201ENST00000259883 DYRK4Q9NR20 520 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 ZNF282Q9UDV7 671 aaPredicted RBP12.63□□□□□ -0.39
PGBD1-201ENST00000259883 INSL5Q9Y5Q6 135 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 SCN8AQ9UQD0 1980 aa12.63□□□□□ -0.39
PGBD1-201ENST00000259883 GSAPA4D1B5 854 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 GFYI3L273 518 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 MYL12BO14950 172 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 CPNE3O75131 537 aaKnown RBP12.62□□□□□ -0.39
PGBD1-201ENST00000259883 TSPAN19P0C672 248 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 IL1RNP18510 177 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 ZNF763Q0D2J5 394 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 SMU1Q2TAY7 513 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 ZNF284Q2VY69 593 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 ATAT1Q5SQI0 421 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 ANXA8L1Q5VT79 327 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 RAB43Q86YS6 212 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 MMAAQ8IVH4 418 aaKnown RBP12.62□□□□□ -0.39
PGBD1-201ENST00000259883 AP2M1Q96CW1 435 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 REEP4Q9H6H4 257 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 ANKRA2Q9H9E1 313 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 HHATLQ9HCP6 504 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 SEMA3GQ9NS98 782 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 KIAA0100Q14667 2235 aaKnown RBP12.62□□□□□ -0.39
PGBD1-201ENST00000259883 PPM1DO15297 605 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 SOCS5O75159 536 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 SLITRK5O94991 958 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 S100A1P23297 94 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 MVDP53602 400 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 MANFP55145 182 aaKnown RBP12.62□□□□□ -0.39
PGBD1-201ENST00000259883 SPHARQ15513 63 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 TEAD4Q15561 434 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 RNASE12Q5GAN4 147 aaKnown RBP12.62□□□□□ -0.39
PGBD1-201ENST00000259883 PDZK1Q5T2W1 519 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 PLAG1Q6DJT9 500 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 TRIM40Q6P9F5 258 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 GHDCQ8N2G8 530 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 KIAA1958Q8N8K9 716 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 GATAD2BQ8WXI9 593 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 FOPNLQ96NB1 174 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 BCL7BQ9BQE9 202 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 TSSK6Q9BXA6 273 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 SPATA6Q9NWH7 488 aaPredicted RBP12.62□□□□□ -0.39
PGBD1-201ENST00000259883 CFL2Q9Y281 166 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 PADI2Q9Y2J8 665 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 SCN2AQ99250 2005 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 ANKRD34BA5PLL1 514 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 FFAR1O14842 300 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 CSO75390 466 aaKnown RBP12.62□□□□□ -0.39
PGBD1-201ENST00000259883 PSMA1P25786 263 aaKnown RBP12.62□□□□□ -0.39
PGBD1-201ENST00000259883 HTR3AP46098 478 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 ALDH6A1Q02252 535 aaKnown RBP12.62□□□□□ -0.39
PGBD1-201ENST00000259883 PUM1Q14671 1186 aaKnown RBP eCLIP12.62□□□□□ -0.39
PGBD1-201ENST00000259883 BCL2A1Q16548 175 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 ZNF697Q5TEC3 545 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 LIPJQ5W064 366 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 GDPD4Q6W3E5 623 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 CCDC80Q76M96 950 aa12.62□□□□□ -0.39
PGBD1-201ENST00000259883 LACC1Q8IV20 430 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms