RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 ZFP57Q9NU63 452 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 SAGE1Q9NXZ1 904 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 KLHL9Q9P2J3 617 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 MSCO60682 206 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 OAS1P00973 400 aaKnown RBP12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 EPOP01588 193 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 AMD1P17707 334 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 PROX2Q3B8N5 592 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 ALG1LQ6GMV1 187 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 CREB3L2Q70SY1 520 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 MS4A15Q8N5U1 240 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 TFAP2CQ92754 450 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 HIST1H2AAQ96QV6 131 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 MROQ9BYG7 248 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 BCAS3Q9H6U6 928 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 IL37Q9NZH6 218 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 LRFN1Q9P244 771 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 TOPAZ1Q8N9V7 1692 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 SNED1Q8TER0 1413 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 A0A1W2PQ67 120 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 EFCAB7A8K855 629 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 RFXAPO00287 272 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 TOR1AO14656 332 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 CRTAPO75718 401 aaPredicted RBP12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 VIPP01282 170 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 AHSGP02765 367 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 T-ENOLP0DO92 83 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 DLX5P56178 289 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 ERVFC1P60507 584 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 ACTBP60709 375 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 ACTG1P63261 375 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 SPIN4Q56A73 249 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 NFKBIDQ8NI38 313 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 SLC6A7Q99884 636 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 SULT4A1Q9BR01 284 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 MFSD1Q9H3U5 465 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 DMAC2Q9NW81 257 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 NLGN3Q9NZ94 848 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 COQ4Q9Y3A0 265 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 UGT2A1Q9Y4X1 527 aa12.68□□□□□ -0.38
PCDHGA3-201ENST00000253812 CLDN5O00501 218 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 CST3P01034 146 aaPredicted RBP12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 LCKP06239 509 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 BCHEP06276 602 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 TPT1P13693 172 aaKnown RBP12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 AHCYP23526 432 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 LEPRP48357 1165 aaKnown RBP12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 NIPAL4Q0D2K0 466 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 SF1Q15637 639 aaKnown RBP12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 BCL7AQ4VC05 210 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 RNASE10Q5GAN6 216 aaKnown RBP12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 CPNE8Q86YQ8 564 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 C12orf42Q96LP6 360 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 NIFKQ9BYG3 293 aaKnown RBP12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 MAGIXQ9H6Y5 334 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 NIPAL2Q9H841 368 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 ATG4BQ9Y4P1 393 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 ADAMTSL3P82987 1691 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 GPR89AB7ZAQ6 455 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 PI15O43692 258 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 ELFN1P0C7U0 828 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 GPR89BP0CG08 455 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 HOXD13P35453 343 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 GMPRP36959 345 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 NSG1P42857 185 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 ACTC1P68032 377 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 ACTA1P68133 377 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 SLC41A3Q96GZ6 507 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 EFCAB11Q9BUY7 163 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 CARS2Q9HA77 564 aaKnown RBP12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 GOLGA2P5Q9HBQ8 144 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 MAFBQ9Y5Q3 323 aaPredicted RBP12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 A0A1W2PQ09 198 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 PMM2O15305 246 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 ZNF821O75541 412 aaPredicted RBP12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 PPM1AP35813 382 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 HK3P52790 923 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 CRISP1P54107 249 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 FLI1Q01543 452 aaPredicted RBP12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 DCST2Q5T1A1 773 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 PXDC1Q5TGL8 231 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 C1orf94Q6P1W5 598 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 DPPA2Q7Z7J5 298 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 FAM83FQ8NEG4 500 aaPredicted RBP12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 SLC5A7Q9GZV3 580 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 RANGRFQ9HD47 186 aaPredicted RBP12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 CENPMQ9NSP4 180 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 FKBPLQ9UIM3 349 aa12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 TIMM8BQ9Y5J9 83 aaPredicted RBP12.67□□□□□ -0.38
PCDHGA3-201ENST00000253812 SCAMP1O15126 338 aa12.66□□□□□ -0.38
PCDHGA3-201ENST00000253812 TREHO43280 583 aa12.66□□□□□ -0.38
PCDHGA3-201ENST00000253812 MATN4O95460 622 aa12.66□□□□□ -0.38
PCDHGA3-201ENST00000253812 DDCP20711 480 aa12.66□□□□□ -0.38
PCDHGA3-201ENST00000253812 KDELR2P33947 212 aa12.66□□□□□ -0.38
PCDHGA3-201ENST00000253812 EIF4HQ15056 248 aaKnown RBP12.66□□□□□ -0.38
PCDHGA3-201ENST00000253812 SLC35F1Q5T1Q4 408 aa12.66□□□□□ -0.38
PCDHGA3-201ENST00000253812 GPR157Q5UAW9 335 aa12.66□□□□□ -0.38
PCDHGA3-201ENST00000253812 SLC22A25Q6T423 547 aa12.66□□□□□ -0.38
PCDHGA3-201ENST00000253812 CEACAM20Q6UY09 585 aa12.66□□□□□ -0.38
PCDHGA3-201ENST00000253812 SIAH1Q8IUQ4 282 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms